Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1825 and GFF1826 are separated by 11 nucleotidesGFF1826 and GFF1827 are separated by 357 nucleotidesGFF1827 and GFF1828 are separated by 8 nucleotidesGFF1828 and GFF1829 overlap by 4 nucleotides GFF1825 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10), at 690,314 to 690,760 GFF1825 GFF1826 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15), at 690,772 to 691,650 GFF1826 GFF1827 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60), at 692,008 to 693,480 GFF1827 GFF1828 - 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-), at 693,489 to 694,262 GFF1828 GFF1829 - 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-), at 694,259 to 694,909 GFF1829
Group Condition GFF1825 GFF1826 GFF1827 GFF1828 GFF1829
carbon source Ying_all64 rep B; time point 1 -0.6 +0.3 +0.1 -0.1 -0.1
carbon source Ying_Nucleobase14 rep A; time point 1 -0.6 +0.1 +0.1 -0.0 +0.1
carbon source Ying_Others16 rep C; time point 1 -0.4 +0.1 +0.1 +0.1 -0.1
carbon source Ying_all64 rep C; time point 1 -0.4 +0.1 +0.1 -0.0 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.2 +0.1 +0.1 +0.2 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -0.4 -0.1 +0.1 +0.2 +0.3
carbon source Ying_AminoAcid20 rep A; time point 1 -0.3 -0.0 +0.2 +0.3 +0.0
carbon source Ying_Others16 rep C; time point 3 +0.3 -0.0 -0.0 +0.0 -0.1
carbon source Ying_all64 rep B; time point 3 +0.2 +0.1 -0.0 -0.0 -0.1
carbon source Ying_all64 rep B; time point 2 -0.2 +0.1 +0.2 +0.1 +0.0
carbon source Ying_Others16 rep A; time point 2 -0.2 +0.1 +0.1 +0.1 +0.1
carbon source Ying_all64 rep C; time point 3 +0.4 -0.3 -0.2 +0.0 +0.2
carbon source Ying_all64 rep C; time point 2 +0.0 +0.0 -0.0 -0.2 +0.4
carbon source Ying_sugar7 rep A; time point 1 -0.1 +0.2 +0.2 -0.1 +0.2
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 +0.3 +0.1 +0.0 +0.0
carbon source Ying_sugar7 rep A; time point 3 +0.3 -0.0 +0.1 -0.1 -0.0
carbon source Ying_AminoAcid20 rep C; time point 3 +0.4 +0.0 +0.1 +0.0 -0.1
carbon source Ying_sugar7 rep A; time point 2 -0.3 +0.1 +0.2 +0.3 +0.1
carbon source Ying_Nucleobase14 rep C; time point 2 -0.3 +0.1 +0.1 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.1 +0.2 +0.0 +0.2 +0.0
carbon source Ying_AminoAcid20 rep A; time point 3 +0.4 +0.0 -0.1 -0.0 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -0.3 +0.2 +0.2 +0.2 +0.1
carbon source Ying_Others16 rep B; time point 3 +0.3 +0.0 +0.0 +0.2 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.4 +0.1 +0.1 -0.1 -0.0
carbon source Ying_sugar7 rep C; time point 2 +0.1 +0.2 +0.2 -0.0 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.1 +0.2 +0.2 +0.2 +0.1
carbon source Ying_all64 rep A; time point 1 +0.1 +0.0 +0.0 +0.2 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 +0.2 +0.1 +0.0 +0.2
carbon source Ying_Others16 rep B; time point 1 +0.3 +0.1 +0.1 +0.2 -0.0
carbon source Ying_sugar7 rep C; time point 3 +0.4 +0.0 +0.2 -0.0 +0.0
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