Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_09265	PS417_09270	PS417_09275	PS417_09280	PS417_09290
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.0	+0.2	+0.3	-2.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.3	-0.8	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.0	-0.5	+0.1	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	N.D.	+0.2	-0.4	-0.1	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.6	-0.3	+0.2	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.5	-0.2	+0.5	-0.9
soil	soil sample 2; outgrowth in LB	N.D.	+0.1	-0.1	+0.1	-1.1
phage	P. simiae ORA MOI 1	N.D.	-0.1	-0.3	+0.2	-0.7
stress	Spectinomycin 0.4 mg/ml	N.D.	+0.2	-0.1	-0.3	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-0.1	-0.8	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.4	-0.5	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.7	-0.1	+0.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.3	-0.1	-0.4	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+0.5	-0.2	-0.0	-0.5
phage	P. simiae Grant Run MOI 10	N.D.	+0.5	-0.1	+0.1	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.8	-0.1	-0.6	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.5	+0.0	+0.6	-0.4
phage	P. simiae OR Antrim MOI 0.1	N.D.	+0.1	+0.2	+0.4	-0.9
phage	JP1 MOI 10	N.D.	+0.3	+0.1	+0.5	-1.0
seeds	Growth on radish seeds for 72 hours	N.D.	+0.5	+0.1	+0.3	-0.9
phage	P. simiae Grant Run MOI 0.1	N.D.	+0.3	-0.3	+0.4	-0.4
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	+0.3	-0.8	+0.2	+0.4
phage	P. simiae OR Antrim MOI 10	N.D.	+0.1	+0.1	+0.5	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.3	-0.3	-0.3	+0.4
seeds	Growth on radish seeds for 72 hours	N.D.	+0.4	-0.6	-0.2	+0.7
phage	P. simiae Grant Run MOI 10	N.D.	+0.5	+0.0	+0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+0.2	+0.3	+0.4	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.6	-0.2	+0.1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	N.D.	+0.2	-0.2	+0.3	+0.6
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	N.D.	+0.5	-0.0	+0.5	+0.7