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Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1822 and GFF1823 are separated by 4 nucleotides
GFF1823 and GFF1824 are separated by 190 nucleotides
GFF1824 and GFF1825 overlap by 4 nucleotides
GFF1825 and GFF1826 are separated by 230 nucleotides
GFF1822 - Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway, at 1,842,757 to 1,843,539
GFF1822
GFF1823 - Pyrimidine monooxygenase RutA (EC 1.14.99.46), at 1,843,544 to 1,844,638
GFF1823
GFF1824 - hypothetical protein, at 1,844,829 to 1,845,419
GFF1824
GFF1825 - Two-component transcriptional response regulator, NarL/FixJ family, at 1,845,416 to 1,846,132
GFF1825
GFF1826 - FIG002283: Isochorismatase family protein, at 1,846,363 to 1,847,022
GFF1826
Group
Condition
GFF1822
GFF1823
GFF1824
GFF1825
GFF1826
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.6
+0.0
-0.8
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.4
-0.2
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.2
-0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
-0.0
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.0
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
+0.1
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
-0.4
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.2
+0.2
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
+0.1
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
+0.2
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
+0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
-0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
+0.3
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.3
+0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.2
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.2
+0.1
+0.1
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