Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1812 and GFF1813 are separated by 36 nucleotidesGFF1813 and GFF1814 are separated by 17 nucleotidesGFF1814 and GFF1815 overlap by 4 nucleotidesGFF1815 and GFF1816 are separated by 7 nucleotides GFF1812 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 476,098 to 476,751 GFF1812 GFF1813 - Acetylornithine deacetylase-like protein Acry_1162, at 476,788 to 478,014 GFF1813 GFF1814 - 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) / Allantoate amidohydrolase (EC 3.5.3.9), at 478,032 to 479,810 GFF1814 GFF1815 - Uricase (urate oxidase) (EC 1.7.3.3), at 479,807 to 480,769 GFF1815 GFF1816 - Transcriptional regulator, GntR family, at 480,777 to 481,451 GFF1816
Group Condition GFF1812 GFF1813 GFF1814 GFF1815 GFF1816
complex community Community=arabino-guar; Passage=4 -0.2 -1.7 -0.7 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.6 -1.5 -0.1 -0.2 N.D.
complex community Community=guar; Passage=4 +0.2 -1.7 -0.7 +0.1 N.D.
complex community Community=guar; Passage=4 -1.2 -0.6 -0.2 -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.5 -1.0 -0.2 -0.2 N.D.
complex community Community=guar; Passage=4 -0.2 -0.4 -0.6 -0.6 N.D.
complex community Community=Locust bean gum; Passage=4 +0.5 -1.1 -0.8 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 -0.5 -0.6 -0.1 N.D.
complex community Community=guar; Passage=4 -0.5 -1.0 +0.1 -0.1 N.D.
complex community Community=Kojac gum; Passage=4 -0.4 -0.6 -0.0 -0.5 N.D.
complex community Community=Locust bean gum; Passage=4 +0.7 -1.1 -0.3 -0.7 N.D.
complex community Community=Locust bean gum; Passage=4 +0.6 -1.1 -0.2 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.2 -0.3 +0.0 N.D.
complex community Community=Kojac gum; Passage=1 -0.2 -0.4 -0.0 -0.1 N.D.
phage phage_bap4 -0.3 -0.2 -0.0 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.9 +0.6 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.3 +0.1 -0.2 N.D.
complex community Community=Locust bean gum; Passage=1 +0.4 -0.1 -0.4 -0.2 N.D.
no phage control no phage control -0.1 -0.1 +0.1 -0.2 N.D.
phage phage_bap4 -0.2 -0.1 +0.2 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.2 +0.1 +0.1 N.D.
phage phage_bap4 -0.2 -0.1 +0.3 -0.1 N.D.
phage phage_bap4 -0.1 -0.2 +0.3 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.2 +0.3 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 +0.3 +0.1 N.D.
no phage control no phage control +0.2 -0.1 +0.3 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 -0.2 -0.0 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.3 +0.4 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.5 -0.0 +0.1 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.2 +0.2 +0.2 N.D.
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