Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1788 and GFF1789 are separated by 50 nucleotidesGFF1789 and GFF1790 are separated by 13 nucleotidesGFF1790 and GFF1791 overlap by 1 nucleotidesGFF1791 and GFF1792 are separated by 142 nucleotides GFF1788 - hypothetical protein, at 449,215 to 449,436 GFF1788 GFF1789 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 449,487 to 450,257 GFF1789 GFF1790 - Hydroxymethylpyrimidine ABC transporter, ATPase component, at 450,271 to 451,143 GFF1790 GFF1791 - Hydroxymethylpyrimidine ABC transporter, substrate-binding component, at 451,143 to 452,177 GFF1791 GFF1792 - Transcriptional regulator, IclR family, at 452,320 to 453,195 GFF1792
Group Condition GFF1788 GFF1789 GFF1790 GFF1791 GFF1792
complex community Community=Locust bean gum; Passage=4 -5.1 +0.5 +0.4 +0.7 +0.0
complex community Community=guar; Passage=4 -0.5 -1.1 +0.2 -1.2 -0.4
complex community Community=Locust bean gum; Passage=4 -2.5 +0.2 -0.1 -0.1 -0.2
complex community Community=guar; Passage=4 -1.0 -1.6 -0.3 +0.6 -0.3
complex community Community=Locust bean gum; Passage=4 -0.4 +0.7 -1.1 -1.6 -0.3
complex community Community=Kojac gum; Passage=4 -2.2 +1.4 +0.1 -0.7 -1.1
complex community Community=guar; Passage=4 +0.2 -1.7 +0.0 -0.1 -0.1
phage phage_bap4 -0.6 -0.7 +0.0 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 -1.9 +0.6 +0.1 +0.3 -0.4
phage phage_bap4 -0.9 -0.6 +0.2 +0.1 -0.0
phage phage_bap4 +0.1 -1.0 -0.0 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 -1.1 +0.6 +0.6 -0.6 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.5 -1.0 -0.0 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.3 +1.1 -0.6 -0.8 -0.4
complex community Community=arabino-guar; Passage=4 +0.5 +0.2 -1.5 +0.4 -0.2
no phage control no phage control -0.2 -0.6 +0.2 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.7 +0.0 +0.2 +0.7 -0.6
complex community Community=Locust bean gum; Passage=1 -0.5 +0.5 -0.2 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.7 -0.5 -0.1 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.8 -0.5 -0.1 -0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.9 +0.1 -0.0 -0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 +0.3 -0.3 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.7 +0.3 +0.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +1.2 -0.0 +0.0 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.5 +0.3 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.8 +0.3 -0.1 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.5 +0.4 +0.1 +0.2 -0.1
complex community Community=guar; Passage=4 +0.3 +1.0 +0.0 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.6 -0.0 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.9 +0.3 -0.2 +0.5 -0.0
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