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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1756 and GFF1757 are separated by 86 nucleotides
GFF1757 and GFF1758 overlap by 4 nucleotides
GFF1758 and GFF1759 are separated by 149 nucleotides
GFF1759 and GFF1760 are separated by 34 nucleotides
GFF1756 - Threonine dehydratase (EC 4.3.1.19), at 619,214 to 620,182
GFF1756
GFF1757 - response regulator in two-component regulatory system with PhoQ, at 620,269 to 620,976
GFF1757
GFF1758 - periplasmic sensor signal transduction histidine kinase, at 620,973 to 622,346
GFF1758
GFF1759 - Tricarboxylate transport protein TctB, at 622,496 to 622,981
GFF1759
GFF1760 - Tricarboxylate transport membrane protein TctA, at 623,016 to 624,527
GFF1760
Group
Condition
GFF1756
GFF1757
GFF1758
GFF1759
GFF1760
carbon source
Ying_sugar7 rep A; time point 3
+0.0
-1.3
-1.4
-1.4
-1.4
carbon source
Ying_sugar7 rep C; time point 3
+0.1
-1.2
-1.4
-1.3
-1.3
carbon source
Ying_sugar7 rep B; time point 2
+0.0
-1.2
-1.1
-1.1
-1.4
carbon source
Ying_Others16 rep B; time point 3
+0.2
-1.0
-1.3
-1.1
-1.5
carbon source
Ying_sugar7 rep A; time point 2
+0.1
-1.1
-1.0
-1.3
-1.3
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.0
-1.0
-1.1
-1.0
-1.1
carbon source
Ying_sugar7 rep C; time point 2
+0.1
-0.8
-0.8
-1.3
-1.2
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.2
-1.0
-1.0
-1.0
-1.1
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.0
-0.8
-0.7
-1.0
-1.0
carbon source
Ying_Others16 rep A; time point 3
+0.8
-1.2
-0.9
-1.1
-1.1
carbon source
Ying_sugar7 rep C; time point 1
+0.3
-0.8
-0.9
-1.0
-1.0
carbon source
Ying_sugar7 rep B; time point 1
+0.2
-0.7
-0.9
-0.9
-1.0
carbon source
Ying_sugar7 rep A; time point 1
+0.3
-0.7
-0.9
-1.0
-0.9
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.4
-0.7
-0.8
-1.0
-1.1
carbon source
Ying_OrganicAcid7 rep C; time point 3
+0.3
-1.0
-0.6
-0.9
-0.9
carbon source
Ying_Others16 rep C; time point 3
+0.2
-0.8
-0.6
-0.9
-1.0
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.2
-0.8
-0.7
-0.7
-0.9
carbon source
Ying_sugar7 rep B; time point 3
+0.2
-0.8
-0.5
-0.7
-0.8
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.1
-0.6
-0.4
-0.6
-0.7
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
-0.3
-0.4
-0.7
-0.7
carbon source
Ying_all64 rep B; time point 3
+0.2
-0.5
-0.5
-0.4
-0.7
carbon source
Ying_all64 rep A; time point 3
+0.1
-0.3
-0.5
-0.5
-0.7
carbon source
Ying_Others16 rep B; time point 2
-0.0
-0.4
-0.3
-0.6
-0.5
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.2
-0.4
-0.4
-0.6
-0.6
carbon source
Ying_Others16 rep C; time point 2
+0.2
-0.3
-0.3
-0.6
-0.6
carbon source
Ying_Others16 rep C; time point 1
+0.0
-0.3
-0.4
-0.5
-0.5
carbon source
Ying_Others16 rep A; time point 2
+0.2
-0.4
-0.3
-0.5
-0.5
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.2
-0.3
-0.4
-0.3
-0.5
carbon source
Ying_Others16 rep A; time point 1
+0.5
-0.3
-0.3
-0.4
-0.4
carbon source
Ying_all64 rep C; time point 2
+0.1
+0.7
+0.7
+0.3
+0.0
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