Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF173 and GFF174 are separated by 100 nucleotidesGFF174 and GFF175 are separated by 36 nucleotidesGFF175 and GFF176 overlap by 1 nucleotidesGFF176 and GFF177 overlap by 4 nucleotides GFF173 - Hexuronate utilization operon transcriptional repressor ExuR, at 204,593 to 205,327 GFF173 GFF174 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 205,428 to 206,258 GFF174 GFF175 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 206,295 to 206,960 GFF175 GFF176 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 206,960 to 207,619 GFF176 GFF177 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 207,616 to 208,386 GFF177
Group Condition GFF173 GFF174 GFF175 GFF176 GFF177
complex community Community=Kojac gum; Passage=4 +0.1 +0.2 -0.3 +0.1 -2.5
complex community Community=arabino-guar; Passage=4 -0.1 -0.8 -0.3 +0.1 -0.9
complex community Community=Locust bean gum; Passage=4 -0.4 +0.1 -0.2 -0.7 -0.5
complex community Community=guar; Passage=4 -0.1 -1.0 +0.4 -0.2 -0.4
complex community Community=guar; Passage=4 -0.5 -0.3 -0.7 -0.4 +0.6
phage phage_bap4 +0.1 +0.1 -0.1 -0.5 -0.8
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.2 -0.1 -0.1 -0.9
complex community Community=guar; Passage=4 -0.4 -0.1 -0.2 +0.1 -0.2
complex community Community=Locust bean gum; Passage=1 -0.0 -0.2 -0.0 -0.1 -0.6
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 -0.1 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.2 -0.1 -0.1 -0.6
complex community Community=Kojac gum; Passage=1 -0.0 -0.1 -0.1 +0.2 -0.7
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.2 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.1 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.3 -0.2 -0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -0.0 +0.1 -0.5
complex community Community=Locust bean gum; Passage=4 -0.6 +0.1 -0.4 +0.5 -0.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.3 -0.2 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.4 -0.2 +0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.0 -0.3 +0.4
complex community Community=Locust bean gum; Passage=4 +0.4 +0.0 -0.3 -0.4 +0.1
phage phage_bap4 +0.1 +0.3 +0.1 -0.0 -0.5
complex community Community=arabino-guar; Passage=4 -0.1 +0.6 -0.2 -0.2 -0.1
phage phage_bap4 +0.2 +0.3 +0.0 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 -0.2 -0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 -0.2 -0.2 +0.5
phage phage_bap4 +0.2 +0.3 -0.1 -0.5 +0.6
complex community Community=arabino-guar; Passage=4 -0.3 -0.6 +0.1 +0.2 +1.1
complex community Community=guar; Passage=4 -0.1 +0.7 +0.4 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 +0.0 -0.0 +0.8
remove
GFF173
plot
remove
GFF174
plot
remove
GFF175
remove
GFF176
plot
remove
GFF177
plot