Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1739 and GFF1740 are separated by 9 nucleotidesGFF1740 and GFF1741 are separated by 76 nucleotidesGFF1741 and GFF1742 are separated by 116 nucleotidesGFF1742 and GFF1743 are separated by 46 nucleotides GFF1739 - Glutamate carboxypeptidase (EC 3.4.17.11), at 398,629 to 399,906 GFF1739 GFF1740 - Transcriptional regulator, LysR family, at 399,916 to 400,827 GFF1740 GFF1741 - UPF0324 inner membrane protein YeiH, at 400,904 to 401,956 GFF1741 GFF1742 - hypothetical protein, at 402,073 to 402,492 GFF1742 GFF1743 - Transcriptional regulator, LysR family, at 402,539 to 403,558 GFF1743
Group Condition GFF1739 GFF1740 GFF1741 GFF1742 GFF1743
complex community Community=arabino-guar; Passage=4 -0.5 -1.4 -0.4 -1.6 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -1.0 -0.3 -1.6 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.3 -1.1 -1.6 -0.1
complex community Community=arabino-guar; Passage=4 -0.5 -0.6 -0.3 -2.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 -0.5 -2.1 -0.4
complex community Community=arabino-guar; Passage=4 +0.6 -0.1 -0.7 -2.3 +0.1
complex community Community=Kojac gum; Passage=4 +0.5 +0.3 -3.2 +0.4 -0.1
no phage control no phage control +0.0 -0.6 +0.1 -0.9 -0.1
phage phage_bap4 +0.0 -0.1 -0.4 -1.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 -0.3 +0.1 -0.4 -0.3
phage phage_bap4 -0.0 -0.4 +0.1 -1.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 +0.4 -1.1 -0.3
phage phage_bap4 +0.1 -0.1 -0.6 -0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.3 -0.2 -0.8 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.2 +0.4 -0.8 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.2 -0.1 -1.0 +0.0
complex community Community=Locust bean gum; Passage=4 +0.6 -0.1 +0.3 -1.9 +0.4
phage phage_bap4 +0.1 -0.4 +0.4 -0.5 -0.1
complex community Community=arabino-guar; Passage=4 +0.5 -0.4 -0.9 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.7 +0.7 -0.1 +0.0
complex community Community=guar; Passage=4 +0.4 +0.1 +0.3 -0.7 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.5 +0.6 -0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 +0.2 +0.7 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 +0.0 +1.0 +0.1
complex community Community=guar; Passage=4 +0.6 +0.0 -0.0 +0.9 -0.4
complex community Community=guar; Passage=4 +0.4 -0.4 -1.2 +2.0 +0.2
phage phage_bap4 -0.2 +0.2 +0.3 +0.4 +0.5
complex community Community=guar; Passage=4 +0.2 -0.4 +0.3 +1.3 +0.4
complex community Community=Locust bean gum; Passage=4 -0.1 +0.6 -0.1 +1.8 +0.1
complex community Community=Locust bean gum; Passage=4 +0.7 +0.3 +0.2 +1.6 -0.1
remove
GFF1739
plot		 remove
GFF1740
plot		 remove
GFF1741		 remove
GFF1742
plot		 remove
GFF1743
plot