Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_08790	PS417_08795	PS417_08800	PS417_08805	PS417_08810
carbon source	Inosine (C)	-0.3	-0.5	N.D.	-3.9	-3.0
carbon source	Inosine (C)	+0.1	-0.4	N.D.	-3.5	-2.8
carbon source	2'-Deoxyinosine 5 mM (C)	-0.2	+0.1	N.D.	-1.6	-2.9
carbon source	2'-Deoxyinosine 5 mM (C)	-0.0	+0.1	N.D.	-1.9	-2.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.1	-0.1	N.D.	-1.9	-1.7
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.2	-0.0	N.D.	-1.6	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9	-0.0	N.D.	-0.4	-0.3
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.2	-0.1	N.D.	-0.1	-1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	-0.2	N.D.	-0.4	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.6	N.D.	-0.3	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4	-0.3	N.D.	-0.5	+0.1
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	-0.2	+0.0	N.D.	+0.2	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.3	N.D.	+0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.1	N.D.	-0.1	+0.1
soil	soil sample 8; outgrowth in LB	-0.7	-0.2	N.D.	+0.2	-0.2
seeds	Growth on radish seeds for 72 hours	-0.6	-0.6	N.D.	+0.1	+0.2
carbon source	L-Valine (C)	+0.2	-0.4	N.D.	-0.3	-0.3
phage	Wcs_1	-0.4	-0.4	N.D.	-0.2	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	+0.1	N.D.	+0.2	+0.1
phage	JP1 MOI 1	-0.1	-0.4	N.D.	+0.4	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.6	-0.5	N.D.	-0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.4	N.D.	+0.2	+0.3
soil	soil sample 6; outgrowth in LB	-0.2	-0.5	N.D.	+0.2	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7	-0.0	N.D.	+0.5	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3	-0.3	N.D.	+0.4	-0.3
phage	JP1 MOI 1	+0.2	+0.5	N.D.	-0.3	-0.2
seeds	Growth on radish seeds for 72 hours	+0.3	+0.7	N.D.	-0.6	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	+0.4	N.D.	-0.5	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	+0.5	N.D.	-0.4	+0.3
phage	JP1 MOI 10	+0.5	-0.3	N.D.	+0.5	+0.4