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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1727 and GFF1728 are separated by 229 nucleotides
GFF1728 and GFF1729 are separated by 319 nucleotides
GFF1729 and GFF1730 are separated by 188 nucleotides
GFF1730 and GFF1731 are separated by 150 nucleotides
GFF1727 - ATP synthase epsilon chain (EC 3.6.3.14), at 25,755 to 26,168
GFF1727
GFF1728 - Putative membrane protein, at 26,398 to 27,096
GFF1728
GFF1729 - N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157), at 27,416 to 28,786
GFF1729
GFF1730 - Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16), at 28,975 to 30,804
GFF1730
GFF1731 - SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA, at 30,955 to 32,745
GFF1731
Group
Condition
GFF1727
GFF1728
GFF1729
GFF1730
GFF1731
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
-0.3
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
-0.3
N.D.
N.D.
-0.1
phage
6F2_phage 15 MOI
N.D.
-0.1
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
N.D.
+0.1
N.D.
N.D.
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
-0.1
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
N.D.
-0.1
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
N.D.
-0.3
N.D.
N.D.
+0.1
phage
6F2_phage 15 MOI
N.D.
+0.0
N.D.
N.D.
-0.2
micoeukaryotes
C.elegans, mixed culture-2
N.D.
+0.1
N.D.
N.D.
-0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-1
N.D.
+0.1
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
N.D.
-0.3
N.D.
N.D.
+0.2
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
+0.1
N.D.
N.D.
-0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-2
N.D.
+0.1
N.D.
N.D.
-0.2
phage
phi19h1_phage 15 MOI
N.D.
+0.1
N.D.
N.D.
-0.2
phage
LB_plus_SM_buffer with Ffm_phage 0.01875 MOI
N.D.
-0.2
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
N.D.
-0.2
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
N.D.
-0.2
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
N.D.
-0.2
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
N.D.
-0.1
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
N.D.
+0.2
N.D.
N.D.
-0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
-0.0
N.D.
N.D.
+0.2
phage
6H2_phage 10 MOI; agar plate assay
N.D.
+0.2
N.D.
N.D.
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
+0.0
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
N.D.
+0.1
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
+0.1
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
+0.1
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
N.D.
-0.0
N.D.
N.D.
+0.3
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
N.D.
+0.1
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
-0.0
N.D.
N.D.
+0.3
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
+0.2
N.D.
N.D.
+0.4
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