Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1726 and GFF1727 are separated by 89 nucleotidesGFF1727 and GFF1728 are separated by 188 nucleotidesGFF1728 and GFF1729 are separated by 110 nucleotidesGFF1729 and GFF1730 are separated by 706 nucleotides GFF1726 - Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system, at 374,559 to 386,978 GFF1726 GFF1727 - no description, at 387,068 to 387,604 GFF1727 GFF1728 - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4), at 387,793 to 389,034 GFF1728 GFF1729 - HIPA PROTEIN, at 389,145 to 390,371 GFF1729 GFF1730 - Dihydrofolate reductase homolog, at 391,078 to 391,734 GFF1730
Group Condition GFF1726 GFF1727 GFF1728 GFF1729 GFF1730
complex community Community=guar; Passage=4 -0.1 -0.6 -0.4 -0.0 -1.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.3 +0.1 -0.4 -1.1
complex community Community=Kojac gum; Passage=4 -0.1 -0.1 -0.0 -0.2 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.4 -0.0 -0.2 -0.5
complex community Community=Locust bean gum; Passage=4 -0.1 -0.4 +0.1 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.1 -0.1 -0.2 -0.5
phage phage_bap4 -0.1 -0.1 -0.1 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.6 -0.1 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.0 -0.7 -0.1 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.1 -0.2 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.4 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.1 -0.2 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.1 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.3 -0.0 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.1 -0.1 -0.0 -0.3
phage phage_bap4 -0.1 -0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.1 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 -0.1 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.7 +0.2 +0.2 -0.1
phage phage_bap4 -0.0 -0.1 +0.1 +0.1 -0.3
complex community Community=guar; Passage=4 -0.1 +0.1 +0.1 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.3 -0.0 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 -0.1 -0.1 +0.4
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 -0.2 -0.2 +0.4
complex community Community=guar; Passage=4 -0.0 +0.1 +0.2 +0.2 -0.2
complex community Community=guar; Passage=4 -0.0 -0.2 +0.3 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.3 +0.0 +0.2 +0.4
complex community Community=Kojac gum; Passage=1 -0.1 -0.2 -0.0 +0.0 +0.6
complex community Community=arabino-guar; Passage=4 +0.0 +0.1 +0.3 -0.4 +0.6
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 +0.2 +0.1 +1.1
remove
GFF1726
plot
remove
GFF1727
plot
remove
GFF1728
remove
GFF1729
plot
remove
GFF1730
plot