Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF1709 and GFF1710 are separated by 196 nucleotidesGFF1710 and GFF1711 are separated by 347 nucleotidesGFF1711 and GFF1712 overlap by 7 nucleotidesGFF1712 and GFF1713 are separated by 4 nucleotides GFF1709 - Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1), at 7,761 to 8,180 GFF1709 GFF1710 - Kup system potassium uptake protein, at 8,377 to 10,245 GFF1710 GFF1711 - Putative regulator protein, at 10,593 to 12,089 GFF1711 GFF1712 - FIG00637882: hypothetical protein, at 12,083 to 13,534 GFF1712 GFF1713 - Aspartate--ammonia ligase (EC 6.3.1.1), at 13,539 to 14,531 GFF1713
Group Condition GFF1709 GFF1710 GFF1711 GFF1712 GFF1713
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.4 -0.2 +0.0 +0.2 +0.0
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.3 +0.1 -0.4 +0.3 -0.1
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.4 -0.2 +0.0 +0.1 +0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.2 -0.2 +0.0 +0.3 +0.1
phage 6H2_phage 10 MOI; agar plate assay -0.4 +0.0 -0.2 -0.0 +0.6
phage Br60_phage 15 MOI -0.5 +0.1 +0.1 +0.2 +0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.3 +0.4 +0.0 +0.2 +0.0
phage 6F2_phage 15 MOI +0.5 +0.0 -0.1 -0.2 +0.2
phage LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI +0.3 -0.1 +0.1 +0.1 +0.2
nophagecontrol No phage control +0.5 +0.1 +0.0 -0.1 +0.2
phage Ffm_phage 10 MOI; agar plate assay +0.6 -0.2 +0.1 +0.0 +0.3
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.3 +0.1 +0.3 +0.4 +0.2
phage LB_plus_SM_buffer with Ffm_phage 15 MOI +0.7 +0.1 +0.2 -0.1 -0.1
phage LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI +0.2 +0.1 +0.3 -0.0 +0.3
phage LB_plus_SM_buffer with P22_phage 15 MOI +1.1 +0.1 +0.1 +0.2 -0.6
phage LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI +0.4 +0.1 -0.0 +0.1 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.4 +0.1 +0.1 +0.1 +0.2
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.3 +0.7 +0.0 +0.3 -0.3
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.0 +0.8 +0.1 +0.0 +0.0
phage 6F2_phage 15 MOI +0.3 +0.2 +0.1 +0.2 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI +0.2 +0.5 +0.1 +0.1 +0.1
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI +0.5 +0.5 +0.1 +0.1 -0.1
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI +0.6 +0.4 -0.0 +0.1 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.0 +0.7 +0.1 +0.3 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI +0.3 +1.1 +0.0 +0.0 -0.2
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI -0.5 +1.4 +0.1 +0.2 +0.2
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.5 +0.7 -0.0 +0.1 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.3 +0.2 +0.3 +0.0 +0.7
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI +0.6 +0.8 +0.1 +0.1 -0.1
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.3 +1.7 +0.4 +0.4 -0.2
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