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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1706 and GFF1707 are separated by 51 nucleotides
GFF1707 and GFF1708 are separated by 1 nucleotides
GFF1708 and GFF1709 are separated by 347 nucleotides
GFF1709 and GFF1710 are separated by 11 nucleotides
GFF1706 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) / ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 352,413 to 354,155
GFF1706
GFF1707 - no description, at 354,207 to 354,416
GFF1707
GFF1708 - no description, at 354,418 to 354,618
GFF1708
GFF1709 - no description, at 354,966 to 355,295
GFF1709
GFF1710 - hypothetical protein, at 355,307 to 356,326
GFF1710
Group
Condition
GFF1706
GFF1707
GFF1708
GFF1709
GFF1710
complex community
Community=guar; Passage=4
+0.2
-3.9
-1.9
-0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-1.3
-0.4
-0.3
+0.1
complex community
Community=guar; Passage=4
+0.3
-2.2
+0.3
-0.2
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.0
-1.1
-0.1
-0.6
-0.2
complex community
Community=guar; Passage=4
+0.2
-1.0
-0.7
+0.0
-0.3
complex community
Community=arabino-guar; Passage=4
+0.1
-0.0
-1.1
+0.2
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.7
-0.3
-0.5
-0.0
complex community
Community=arabino-guar; Passage=4
+0.2
+0.1
-0.7
-1.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-0.4
-0.9
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.7
-0.4
-0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.7
-0.5
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.7
-0.3
-0.2
+0.1
phage
phage_bap4
-0.2
-0.4
-0.1
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
+0.1
-0.4
-0.6
-0.1
complex community
Community=Kojac gum; Passage=1
+0.0
-0.9
-0.1
+0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
-0.4
+0.3
-0.3
-0.2
complex community
Community=arabino-guar; Passage=4
-0.1
-1.2
+0.3
+0.4
-0.0
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.5
+0.5
-1.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.4
-0.5
-0.2
-0.1
complex community
Community=Kojac gum; Passage=4
+0.1
-0.9
+0.5
+0.5
-0.5
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.6
+0.7
-0.3
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.2
-0.4
+0.3
-0.1
phage
phage_bap4
-0.0
+0.2
+0.3
-0.5
+0.0
complex community
Community=Locust bean gum; Passage=1
-0.0
-0.4
+0.6
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.5
-0.2
-0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+1.1
+0.2
-0.3
-0.1
complex community
Community=guar; Passage=4
-0.0
+0.1
+0.8
-0.1
+0.1
complex community
Community=arabino-guar; Passage=4
-0.2
+1.5
-0.5
+0.0
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.9
+0.2
-0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.1
+1.0
+0.1
-0.0
+0.3
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