Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF1706 and GFF1707 are separated by 51 nucleotidesGFF1707 and GFF1708 are separated by 1 nucleotidesGFF1708 and GFF1709 are separated by 347 nucleotidesGFF1709 and GFF1710 are separated by 11 nucleotides GFF1706 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) / ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 352,413 to 354,155 GFF1706 GFF1707 - no description, at 354,207 to 354,416 GFF1707 GFF1708 - no description, at 354,418 to 354,618 GFF1708 GFF1709 - no description, at 354,966 to 355,295 GFF1709 GFF1710 - hypothetical protein, at 355,307 to 356,326 GFF1710
Group Condition GFF1706 GFF1707 GFF1708 GFF1709 GFF1710
complex community Community=guar; Passage=4 +0.2 -3.9 -1.9 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -1.3 -0.4 -0.3 +0.1
complex community Community=guar; Passage=4 +0.3 -2.2 +0.3 -0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.0 -1.1 -0.1 -0.6 -0.2
complex community Community=guar; Passage=4 +0.2 -1.0 -0.7 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 -1.1 +0.2 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.7 -0.3 -0.5 -0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.7 -1.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.4 -0.9 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.7 -0.4 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.7 -0.5 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.7 -0.3 -0.2 +0.1
phage phage_bap4 -0.2 -0.4 -0.1 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 -0.4 -0.6 -0.1
complex community Community=Kojac gum; Passage=1 +0.0 -0.9 -0.1 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.4 +0.3 -0.3 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 -1.2 +0.3 +0.4 -0.0
complex community Community=Locust bean gum; Passage=4 -0.4 +0.5 +0.5 -1.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.4 -0.5 -0.2 -0.1
complex community Community=Kojac gum; Passage=4 +0.1 -0.9 +0.5 +0.5 -0.5
complex community Community=Locust bean gum; Passage=4 +0.1 -0.6 +0.7 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.2 -0.4 +0.3 -0.1
phage phage_bap4 -0.0 +0.2 +0.3 -0.5 +0.0
complex community Community=Locust bean gum; Passage=1 -0.0 -0.4 +0.6 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.5 -0.2 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +1.1 +0.2 -0.3 -0.1
complex community Community=guar; Passage=4 -0.0 +0.1 +0.8 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.2 +1.5 -0.5 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.9 +0.2 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 +1.0 +0.1 -0.0 +0.3
remove
GFF1706
plot
remove
GFF1707
plot
remove
GFF1708
remove
GFF1709
plot
remove
GFF1710
plot