Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1701 and GFF1702 are separated by 170 nucleotidesGFF1702 and GFF1703 are separated by 167 nucleotidesGFF1703 and GFF1704 overlap by 8 nucleotidesGFF1704 and GFF1705 are separated by 24 nucleotides GFF1701 - BUG/TctC family periplasmic protein, at 347,303 to 348,307 GFF1701 GFF1702 - hypothetical protein, at 348,478 to 349,164 GFF1702 GFF1703 - DNA for 3-methylaspartate ammonia-lyase, glutamate mutase, at 349,332 to 350,723 GFF1703 GFF1704 - FIG00901292: hypothetical protein, at 350,716 to 351,024 GFF1704 GFF1705 - ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) / C-terminal AAA-associated domain, at 351,049 to 352,410 GFF1705
Group Condition GFF1701 GFF1702 GFF1703 GFF1704 GFF1705
complex community Community=Kojac gum; Passage=4 +0.0 -0.3 -0.7 -0.4 -0.3
complex community Community=Locust bean gum; Passage=4 -0.4 -0.9 +0.2 -0.3 +0.3
complex community Community=arabino-guar; Passage=4 -0.2 -0.9 -0.1 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 +0.0 -0.5 -0.2
phage phage_bap4 -0.3 -0.0 -0.2 -0.3 -0.2
no phage control no phage control -0.1 -0.1 -0.0 -0.6 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 +0.0 -0.6 -0.3
phage phage_bap4 -0.0 -0.2 -0.1 -0.5 +0.0
phage phage_bap4 -0.2 -0.2 -0.1 -0.3 -0.0
complex community Community=guar; Passage=4 -0.0 -0.3 -0.4 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.2 -0.1 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.0 +0.2 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.1 -0.0 -0.3 -0.3
complex community Community=arabino-guar; Passage=4 -0.5 -0.1 +0.0 +0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 -0.3 -0.2 -0.3
phage phage_bap4 -0.2 -0.3 -0.0 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.1 -0.2 -0.4 -0.0
complex community Community=Locust bean gum; Passage=1 +0.1 -0.1 +0.1 -0.4 +0.0
complex community Community=Kojac gum; Passage=1 -0.0 -0.2 +0.1 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.2 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.3 -0.0 -0.1 -0.3
phage phage_bap4 -0.3 +0.0 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 +0.0 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.3 -0.1 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 +0.2 +0.2 -0.3
complex community Community=guar; Passage=4 -0.3 -0.4 +0.2 +0.6 +0.0
complex community Community=guar; Passage=4 +0.1 -0.2 +0.5 -0.2 -0.1
complex community Community=guar; Passage=4 -0.1 -0.5 +0.0 +1.1 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 +0.1 +0.4 +0.3 +0.5
complex community Community=Locust bean gum; Passage=4 +0.2 +0.3 +0.3 +0.5 -0.0
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