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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1701 and GFF1702 are separated by 47 nucleotides
GFF1702 and GFF1703 are separated by 61 nucleotides
GFF1703 and GFF1704 are separated by 179 nucleotides
GFF1704 and GFF1705 are separated by 115 nucleotides
GFF1701 - Cold shock protein of CSP family, at 1,728,138 to 1,728,353
GFF1701
GFF1702 - hypothetical protein, at 1,728,401 to 1,729,078
GFF1702
GFF1703 - hypothetical protein, at 1,729,140 to 1,729,346
GFF1703
GFF1704 - hypothetical protein, at 1,729,526 to 1,729,909
GFF1704
GFF1705 - Electron transfer flavoprotein, alpha subunit, at 1,730,025 to 1,730,957
GFF1705
Group
Condition
GFF1701
GFF1702
GFF1703
GFF1704
GFF1705
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.1
-0.9
-0.8
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.2
-0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.3
+0.0
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.0
+0.4
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.3
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.1
-0.1
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.1
-0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.0
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.1
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.2
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.2
+0.1
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.0
+0.0
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.1
+0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.7
+0.1
-0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
+0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.1
+0.4
+0.1
N.D.
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