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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1698 and GFF1699 are separated by 57 nucleotides
GFF1699 and GFF1700 are separated by 43 nucleotides
GFF1700 and GFF1701 are separated by 92 nucleotides
GFF1701 and GFF1702 are separated by 170 nucleotides
GFF1698 - BUG/TctC family periplasmic protein, at 344,486 to 345,445
GFF1698
GFF1699 - hypothetical protein, at 345,503 to 346,144
GFF1699
GFF1700 - hypothetical protein, at 346,188 to 347,210
GFF1700
GFF1701 - BUG/TctC family periplasmic protein, at 347,303 to 348,307
GFF1701
GFF1702 - hypothetical protein, at 348,478 to 349,164
GFF1702
Group
Condition
GFF1698
GFF1699
GFF1700
GFF1701
GFF1702
complex community
Community=arabino-guar; Passage=4
+0.0
+0.1
-0.5
-0.2
-0.9
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.0
-0.1
-0.4
-0.9
complex community
Community=guar; Passage=4
-0.4
-0.2
+0.1
-0.0
-0.3
complex community
Community=guar; Passage=4
+0.0
-0.1
+0.0
-0.3
-0.4
complex community
Community=arabino-guar; Passage=4
-0.4
+0.4
-0.2
-0.5
-0.1
complex community
Community=guar; Passage=4
-0.3
+0.3
+0.0
-0.1
-0.5
phage
phage_bap4
-0.1
+0.2
-0.2
-0.2
-0.3
phage
phage_bap4
+0.1
-0.1
-0.1
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-0.1
+0.2
-0.2
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.5
-0.4
-0.5
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.1
+0.0
-0.2
+0.1
phage
phage_bap4
-0.0
+0.3
-0.1
-0.0
-0.3
complex community
Community=guar; Passage=4
-0.4
+0.4
+0.0
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.1
+0.3
+0.0
-0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
+0.1
-0.0
-0.2
+0.3
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.3
-0.1
-0.3
+0.0
complex community
Community=Kojac gum; Passage=4
+0.1
+0.1
+0.2
+0.0
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.0
-0.1
-0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
-0.3
+0.1
-0.0
+0.0
complex community
Community=arabino-guar; Passage=4
+0.4
-0.3
-0.0
-0.0
+0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.0
+0.1
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
+0.1
+0.1
-0.1
complex community
Community=arabino-guar; Passage=4
-0.2
+0.4
-0.0
-0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.2
-0.3
+0.1
+0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.1
+0.1
-0.0
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.1
+0.2
+0.1
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.2
+0.1
+0.2
+0.3
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
+0.1
+0.2
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.0
+0.1
+0.1
+0.2
phage
phage_bap4
+0.1
+0.5
+0.1
+0.1
+0.2
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