Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1690 and GFF1691 are separated by 101 nucleotidesGFF1691 and GFF1692 are separated by 7 nucleotidesGFF1692 and GFF1693 are separated by 102 nucleotidesGFF1693 and GFF1694 are separated by 65 nucleotides GFF1690 - KEGG: DNA-binding protein H-NS, at 335,294 to 335,647 GFF1690 GFF1691 - Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake, at 335,749 to 337,110 GFF1691 GFF1692 - Two-component system sensor histidine kinase, at 337,118 to 339,070 GFF1692 GFF1693 - Acetoacetyl-CoA reductase (EC 1.1.1.36), at 339,173 to 339,922 GFF1693 GFF1694 - Na+/H+-dicarboxylate symporter, at 339,988 to 341,337 GFF1694
Group Condition GFF1690 GFF1691 GFF1692 GFF1693 GFF1694
complex community Community=Locust bean gum; Passage=4 -3.8 +0.6 -0.5 +0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.0 +0.1 -0.1 -0.2 -0.2
complex community Community=Kojac gum; Passage=4 -0.2 -0.4 -0.6 +0.6 -0.3
complex community Community=guar; Passage=4 -0.1 +0.1 +0.2 -0.7 -0.3
complex community Community=guar; Passage=4 -0.5 -0.3 +0.4 +0.1 -0.4
complex community Community=guar; Passage=4 -0.4 +0.2 -0.4 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.4 -0.2 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.0 -0.1 -0.3 -0.0
no phage control no phage control +0.2 +0.3 +0.1 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 +0.2 +0.0 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 -0.4 +0.8 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.7 +0.2 -0.3 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.4 -0.1 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.2 +0.9 -0.4 +0.6 -0.1
complex community Community=arabino-guar; Passage=4 -0.5 +0.6 +0.7 -0.1 -0.0
phage phage_bap4 +0.7 +0.2 -0.1 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.2 -0.3 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.7 +0.1 -0.1 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.3 -0.0 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 +0.0 -0.2 -0.1 +0.4
complex community Community=Kojac gum; Passage=1 +0.4 +0.2 -0.0 -0.0 +0.3
complex community Community=arabino-guar; Passage=4 +0.3 -0.1 +0.3 +0.2 +0.2
phage phage_bap4 +0.5 +0.2 +0.1 +0.0 -0.0
phage phage_bap4 +0.3 +0.2 -0.1 +0.4 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 +0.7 -0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.9 +0.2 -0.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus +1.1 +0.3 -0.1 -0.1 -0.1
complex community Community=guar; Passage=4 +1.3 -0.3 -0.5 +0.4 +0.3
complex community Community=Locust bean gum; Passage=4 +1.1 +0.2 +0.2 +0.8 +0.1
complex community Community=arabino-guar; Passage=4 +1.1 +0.1 +0.4 +0.6 +0.3
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