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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1690 and GFF1691 are separated by 5 nucleotides
GFF1691 and GFF1692 are separated by 55 nucleotides
GFF1692 and GFF1693 are separated by 158 nucleotides
GFF1693 and GFF1694 are separated by 423 nucleotides
GFF1690 - Two-component system sensor histidine kinase, at 1,713,283 to 1,714,392
GFF1690
GFF1691 - Two-component transcriptional response regulator, LuxR family, at 1,714,398 to 1,715,147
GFF1691
GFF1692 - polyphosphate-selective porin O, at 1,715,203 to 1,716,507
GFF1692
GFF1693 - hypothetical protein, at 1,716,666 to 1,717,010
GFF1693
GFF1694 - hypothetical protein, at 1,717,434 to 1,718,405
GFF1694
Group
Condition
GFF1690
GFF1691
GFF1692
GFF1693
GFF1694
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.0
-0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.0
-0.1
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
+0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.1
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.1
+0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
+0.1
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
+0.1
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.0
+0.0
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.0
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.1
+0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.2
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.0
-0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.3
-0.0
+0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.2
+0.3
+0.2
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