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Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1677 and GFF1678 are separated by 3 nucleotides
GFF1678 and GFF1679 are separated by 19 nucleotides
GFF1679 and GFF1680 overlap by 4 nucleotides
GFF1680 and GFF1681 are separated by 152 nucleotides
GFF1677 - Class A beta-lactamase (EC 3.5.2.6) => SGM family, at 1,706,221 to 1,707,201
GFF1677
GFF1678 - Ferredoxin, 2Fe-2S, at 1,707,205 to 1,707,540
GFF1678
GFF1679 - Cysteine desulfurase (EC 2.8.1.7), at 1,707,560 to 1,708,648
GFF1679
GFF1680 - Cysteine desulfurase (EC 2.8.1.7), at 1,708,645 to 1,709,679
GFF1680
GFF1681 - Hydrolase SMc00528, alpha/beta fold family, at 1,709,832 to 1,710,488
GFF1681
Group
Condition
GFF1677
GFF1678
GFF1679
GFF1680
GFF1681
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-3.2
-1.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-3.0
-1.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-2.3
-1.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-2.5
-0.9
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-1.8
-1.4
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-1.0
-1.9
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-2.2
-0.6
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-1.8
-1.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.3
-2.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
-0.1
-2.5
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.3
-2.4
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.7
-1.4
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
-2.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
-1.7
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
-1.9
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.3
-1.9
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.6
-0.7
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.4
-1.8
N.D.
N.D.
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