Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1669 and GFF1670 overlap by 11 nucleotidesGFF1670 and GFF1671 overlap by 4 nucleotidesGFF1671 and GFF1672 overlap by 4 nucleotidesGFF1672 and GFF1673 are separated by 30 nucleotides GFF1669 - hypothetical protein, at 314,732 to 316,075 GFF1669 GFF1670 - 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33), at 316,065 to 316,592 GFF1670 GFF1671 - 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33), at 316,589 to 317,863 GFF1671 GFF1672 - BUG/TctC family periplasmic protein, at 317,860 to 318,825 GFF1672 GFF1673 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 318,856 to 319,566 GFF1673
Group Condition GFF1669 GFF1670 GFF1671 GFF1672 GFF1673
complex community Community=guar; Passage=4 -0.4 -1.0 -0.8 -1.7 +0.6
complex community Community=arabino-guar; Passage=4 -0.0 -0.5 -1.5 -0.8 -0.2
complex community Community=guar; Passage=4 -0.1 -0.9 -1.2 +0.1 -0.2
complex community Community=guar; Passage=4 -0.2 -1.4 -0.7 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.6 +0.1 -0.9 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.5 +0.1 -0.4 -0.7
complex community Community=Locust bean gum; Passage=4 -1.0 -0.8 +0.5 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.9 +0.2 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.9 +0.1 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 +0.1 -0.3 +0.0 +0.1 -0.8
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.4 +0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.3 +0.1 -0.3 -0.4
complex community Community=Locust bean gum; Passage=4 +0.3 -1.1 +0.6 -0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 +0.0 -0.6 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.3 -0.1 -0.5 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.6 +0.0 +0.2 +0.2
complex community Community=Kojac gum; Passage=4 -0.2 +0.4 -0.4 +0.4 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.0 -0.2 -0.3 +0.5
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.3 +0.1 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.9 +0.6 +0.2 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.8 +0.2 +0.1 +0.3
phage phage_bap4 +0.3 +0.0 +0.3 +0.2 -0.5
no phage control no phage control +0.1 +0.6 -0.3 -0.1 +0.2
complex community Community=Locust bean gum; Passage=1 -0.3 +0.2 +0.4 +0.5 +0.2
no phage control no phage control +0.3 +0.3 +0.3 +0.5 -0.2
complex community Community=Kojac gum; Passage=1 -0.1 +0.5 +0.4 +0.3 +0.0
complex community Community=Locust bean gum; Passage=4 -0.4 +0.8 -0.2 +0.5 +0.6
complex community Community=guar; Passage=4 +0.5 +0.3 -1.0 +0.6 +1.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.0 -0.1 +0.8 +1.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.3 +0.7 +0.4 +0.7
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