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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF165 and GFF166 are separated by 8 nucleotides
GFF166 and GFF167 are separated by 164 nucleotides
GFF167 and GFF168 overlap by 4 nucleotides
GFF168 and GFF169 overlap by 4 nucleotides
GFF165 - Chromate transport protein ChrA, at 193,101 to 194,468
GFF165
GFF166 - Permease of the drug/metabolite transporter (DMT) superfamily, at 194,477 to 195,532
GFF166
GFF167 - Two-component system sensor histidine kinase, at 195,697 to 199,197
GFF167
GFF168 - MCP methyltransferase, CheR-type, at 199,194 to 200,060
GFF168
GFF169 - Protein-glutamate methylesterase (EC 3.1.1.61), at 200,057 to 200,659
GFF169
Group
Condition
GFF165
GFF166
GFF167
GFF168
GFF169
complex community
Community=guar; Passage=4
+0.1
-0.8
+0.1
-3.1
-1.0
complex community
Community=Kojac gum; Passage=4
+0.0
-0.5
-0.2
-3.3
-0.7
complex community
Community=arabino-guar; Passage=4
+0.0
-0.1
-0.0
-3.2
-1.2
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.4
+0.1
-3.2
-1.0
complex community
Community=guar; Passage=4
-0.1
-0.5
-0.1
-2.4
-1.3
complex community
Community=guar; Passage=4
+0.2
+0.0
-0.1
-3.5
-1.0
complex community
Community=arabino-guar; Passage=4
-0.2
-0.6
+0.0
-3.2
-0.5
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.2
-0.2
-2.8
-1.2
complex community
Community=guar; Passage=4
+0.2
-0.2
-0.0
-2.8
-1.2
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.3
-0.1
-2.9
-0.8
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.2
+0.0
-3.0
-0.9
complex community
Community=arabino-guar; Passage=4
-0.3
+0.2
+0.0
-2.4
-1.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
-0.1
+0.1
-2.0
-0.7
vitamin
M9 with Supernatant from Cyptococcus
+0.0
-0.1
-0.0
-1.8
-0.8
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.0
+0.2
+0.2
-2.1
-1.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.1
+0.1
-2.0
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.2
+0.1
-1.8
-0.7
complex community
Community=arabino-guar; Passage=4
+0.3
-0.1
+0.0
-2.3
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.1
+0.1
-1.9
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.1
+0.2
-1.8
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.1
-0.1
-1.9
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
+0.0
+0.1
-1.7
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
+0.1
+0.1
-1.7
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.2
+0.2
-1.6
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.2
+0.1
-1.9
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.1
+0.1
-1.9
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
+0.0
+0.1
-1.5
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
+0.1
+0.2
-1.7
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.1
+0.1
-1.7
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.3
+0.1
-1.4
-0.6
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