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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1663 and GFF1664 are separated by 17 nucleotides
GFF1664 and GFF1665 overlap by 4 nucleotides
GFF1665 and GFF1666 are separated by 153 nucleotides
GFF1666 and GFF1667 are separated by 46 nucleotides
GFF1663 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 48,704 to 49,093
GFF1663
GFF1664 - Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61), at 49,111 to 50,160
GFF1664
GFF1665 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 50,157 to 51,023
GFF1665
GFF1666 - Methyl-accepting chemotaxis protein, at 51,177 to 52,838
GFF1666
GFF1667 - hypothetical protein, at 52,885 to 53,031
GFF1667
Group
Condition
GFF1663
GFF1664
GFF1665
GFF1666
GFF1667
phage
Ffm_phage 10 MOI; agar plate assay
-1.2
+0.3
-0.8
-0.4
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.5
-0.2
-0.4
-0.6
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.6
+0.1
-0.6
-0.3
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
-0.3
-0.3
-0.3
-0.3
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.2
-0.3
-0.5
-0.0
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-1.0
-0.2
+0.2
+0.3
N.D.
phage
6F2_phage 15 MOI
-0.3
-0.0
+0.2
-0.5
N.D.
nophagecontrol
No phage control
-0.3
+0.2
+0.1
-0.4
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-0.4
-0.1
-0.2
+0.5
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-0.3
+0.2
-0.4
+0.4
N.D.
phage
phi19h1_phage 15 MOI
+0.4
+0.1
+0.3
-0.8
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
-0.1
+0.1
-0.4
+0.3
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.2
+0.2
-0.4
+0.1
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.6
-0.3
-0.3
+0.1
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.3
+0.2
-0.5
+0.1
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.5
+0.2
-0.4
-0.0
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.4
+0.3
-0.1
-0.2
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.3
-0.3
+0.1
+0.3
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
+0.4
-0.2
+0.4
-0.1
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.5
+0.2
+0.3
-0.1
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.6
+0.1
+0.2
-0.1
N.D.
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.2
+0.1
+0.0
+0.6
N.D.
phage
Br60_phage 15 MOI
+0.0
+0.2
+0.4
+0.3
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
+0.4
+0.3
-0.0
+0.3
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
+0.3
+0.1
+0.1
+0.4
N.D.
phage
phi19h1_phage 15 MOI
+0.5
+0.4
+0.1
-0.0
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.0
+0.4
+0.4
+0.2
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.6
+0.4
-0.3
+0.3
N.D.
phage
Br60_phage 15 MOI
+0.5
+0.3
+0.4
-0.1
N.D.
phage
Br60_phage 15 MOI
+0.4
+0.5
+0.5
+0.0
N.D.
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