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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1661 and GFF1662 are separated by 193 nucleotides
GFF1662 and GFF1663 are separated by 10 nucleotides
GFF1663 and GFF1664 are separated by 17 nucleotides
GFF1664 and GFF1665 overlap by 4 nucleotides
GFF1661 - Flagellar biosynthesis protein FlhB, at 46,704 to 47,855
GFF1661
GFF1662 - Chemotaxis response - phosphatase CheZ, at 48,049 to 48,693
GFF1662
GFF1663 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 48,704 to 49,093
GFF1663
GFF1664 - Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61), at 49,111 to 50,160
GFF1664
GFF1665 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 50,157 to 51,023
GFF1665
Group
Condition
GFF1661
GFF1662
GFF1663
GFF1664
GFF1665
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.1
-0.8
-0.3
+0.0
-0.3
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.0
-0.2
-0.6
+0.1
-0.6
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.5
-0.5
+0.1
+0.1
-0.4
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
-0.5
-0.9
+0.1
-0.0
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.2
-0.8
-0.1
+0.1
-0.4
phage
Ffm_phage 10 MOI; agar plate assay
+0.2
+0.6
-1.2
+0.3
-0.8
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.6
-0.4
-1.0
-0.2
+0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.2
-0.4
-0.3
+0.2
-0.4
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.2
-0.8
+0.4
+0.3
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+1.0
-1.6
+0.0
+0.2
-0.0
phage
phi19h1_phage 15 MOI
-0.2
-0.9
+0.4
+0.1
+0.3
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+0.1
+0.5
-0.3
-0.3
-0.3
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
-0.6
-0.4
+0.4
-0.2
+0.4
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+1.1
-0.2
-0.4
-0.1
-0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.6
+0.4
-0.5
-0.1
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+1.5
-1.1
-0.2
+0.3
+0.0
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.8
-0.4
+0.3
-0.3
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+1.1
-0.6
+0.2
+0.0
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.4
-0.6
+0.2
+0.2
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+1.4
-1.1
+0.5
+0.2
+0.3
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.7
+0.5
-0.0
-0.2
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.3
-0.2
+0.5
+0.2
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
+1.0
-0.0
+0.3
-0.0
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+1.2
-0.4
+0.2
+0.5
-0.1
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.8
+0.6
+0.2
+0.1
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+1.2
-0.4
+0.6
+0.1
+0.2
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
+0.7
+0.4
+0.3
+0.1
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.8
+0.3
+0.6
+0.4
-0.3
phage
Br60_phage 15 MOI
+0.3
+0.2
+0.4
+0.5
+0.5
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
+1.0
+0.4
+0.3
+0.1
+0.1
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