Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1658 and GFF1659 are separated by 42 nucleotidesGFF1659 and GFF1660 are separated by 7 nucleotidesGFF1660 and GFF1661 are separated by 106 nucleotidesGFF1661 and GFF1662 overlap by 17 nucleotides GFF1658 - tRNA(Cytosine32)-2-thiocytidine synthetase, at 510,781 to 511,710 GFF1658 GFF1659 - Probable lipoprotein transmembrane, at 511,753 to 512,457 GFF1659 GFF1660 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 512,465 to 514,837 GFF1660 GFF1661 - Phosphoglycerate mutase (EC 5.4.2.1), at 514,944 to 515,585 GFF1661 GFF1662 - low-specificity D-threonine aldolase, at 515,569 to 516,753 GFF1662
Group Condition GFF1658 GFF1659 GFF1660 GFF1661 GFF1662
carbon source Ying_all64 rep C; time point 3 -0.4 +0.0 -0.2 N.D. -0.3
carbon source Ying_sugar7 rep B; time point 3 +0.1 -0.0 -0.3 N.D. -0.1
carbon source Ying_Others16 rep C; time point 2 +0.0 -0.2 -0.1 N.D. -0.0
carbon source Ying_Others16 rep A; time point 3 -0.1 +0.1 -0.1 N.D. -0.1
carbon source Ying_Others16 rep C; time point 3 +0.1 -0.0 -0.2 N.D. -0.0
carbon source Ying_AminoAcid20 rep A; time point 1 -0.1 -0.1 +0.0 N.D. +0.1
carbon source Ying_all64 rep C; time point 2 -0.3 +0.0 +0.2 N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.2 +0.0 N.D. -0.0
carbon source Ying_Others16 rep B; time point 3 -0.1 -0.0 +0.2 N.D. -0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.0 -0.1 +0.1 N.D. +0.0
carbon source Ying_sugar7 rep A; time point 1 +0.1 -0.1 +0.1 N.D. -0.0
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 -0.1 +0.1 N.D. -0.1
carbon source Ying_sugar7 rep A; time point 3 +0.1 -0.1 +0.2 N.D. -0.1
carbon source Ying_all64 rep B; time point 1 +0.1 -0.1 +0.1 N.D. -0.0
carbon source Ying_sugar7 rep C; time point 1 +0.0 -0.1 +0.2 N.D. -0.0
carbon source Ying_AminoAcid20 rep C; time point 2 +0.0 -0.1 +0.2 N.D. +0.0
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.1 +0.2 N.D. -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.0 -0.1 +0.2 N.D. -0.0
carbon source Ying_all64 rep C; time point 1 -0.1 +0.1 +0.2 N.D. +0.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 +0.1 +0.1 N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.1 -0.1 +0.1 N.D. +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.1 +0.0 N.D. +0.2
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 -0.0 +0.1 N.D. +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 +0.2 -0.1 +0.1 N.D. +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 -0.0 +0.2 N.D. +0.1
carbon source Ying_Nucleobase14 rep C; time point 2 +0.1 +0.0 +0.1 N.D. +0.1
carbon source Ying_all64 rep A; time point 3 +0.2 -0.0 +0.1 N.D. +0.1
carbon source Ying_Others16 rep A; time point 2 +0.1 -0.1 +0.1 N.D. +0.2
carbon source Ying_sugar7 rep A; time point 2 +0.1 -0.0 +0.3 N.D. +0.0
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.1 +0.1 +0.4 N.D. -0.1
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