Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1656 and GFF1657 are separated by 40 nucleotidesGFF1657 and GFF1658 are separated by 91 nucleotidesGFF1658 and GFF1659 overlap by 4 nucleotidesGFF1659 and GFF1660 are separated by 23 nucleotides GFF1656 - hypothetical protein, at 296,441 to 298,957 GFF1656 GFF1657 - Nitronate monooxygenase (EC 1.13.12.16), at 298,998 to 300,119 GFF1657 GFF1658 - Transcriptional regulator, LysR family, at 300,211 to 301,086 GFF1658 GFF1659 - Uncharacterized MFS-type transporter, at 301,083 to 302,249 GFF1659 GFF1660 - Type IV fimbrial biogenesis protein PilY1, at 302,273 to 304,027 GFF1660
Group Condition GFF1656 GFF1657 GFF1658 GFF1659 GFF1660
complex community Community=arabino-guar; Passage=4 -0.2 -0.9 -3.7 -0.0 +0.0
complex community Community=Locust bean gum; Passage=4 +0.4 +0.1 -3.7 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 -3.6 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.2 -1.7 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +0.2 +0.3 -2.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.0 -1.0 -0.1 -0.0
phage phage_bap4 +0.0 +0.2 -1.2 -0.1 +0.1
complex community Community=guar; Passage=4 +0.1 +0.5 -1.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.2 -0.8 -0.1 +0.1
complex community Community=guar; Passage=4 +0.2 +0.0 -0.5 +0.0 -0.1
complex community Community=arabino-guar; Passage=4 +0.0 +0.5 -0.2 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.0 +0.1 +0.2 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 +0.7 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.2 +0.5 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.2 +0.6 +0.0 +0.1
complex community Community=guar; Passage=4 +0.3 -0.2 -0.1 +0.3 +0.1
phage phage_bap4 -0.1 -0.2 +1.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.3 +0.8 -0.1 +0.1
no phage control no phage control -0.0 -0.2 +0.9 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.4 +0.7 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.1 +0.7 +0.1 +0.1
no phage control no phage control -0.0 -0.2 +0.9 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.2 +0.7 -0.0 +0.0
phage phage_bap4 -0.0 +0.2 +0.8 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 +0.5 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.0 +0.8 +0.1 +0.2
complex community Community=guar; Passage=4 -0.1 +0.0 +1.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 +1.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 +0.2 -0.1 +1.5 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.0 -0.2 +1.4 -0.1 +0.4
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