Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1649 and GFF1650 overlap by 4 nucleotidesGFF1650 and GFF1651 overlap by 4 nucleotidesGFF1651 and GFF1652 are separated by 7 nucleotidesGFF1652 and GFF1653 are separated by 20 nucleotides GFF1649 - Acyl dehydratase, MaoC-like domain (EC 2.3.1.8), at 504,604 to 505,050 GFF1649 GFF1650 - blr3308; hypothetical protein, at 505,047 to 505,352 GFF1650 GFF1651 - Ureidoglycolate hydrolase (EC 3.5.3.19), at 505,349 to 505,849 GFF1651 GFF1652 - similar to protocatechuate 4,5-dioxygenase beta chain, at 505,857 to 506,702 GFF1652 GFF1653 - Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8), at 506,723 to 507,073 GFF1653
Group Condition GFF1649 GFF1650 GFF1651 GFF1652 GFF1653
carbon source Ying_Nucleobase14 rep B; time point 2 -0.5 N.D. -0.8 -0.7 -0.0
carbon source Ying_Nucleobase14 rep C; time point 2 -0.5 N.D. -0.7 -0.3 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.5 N.D. -0.5 -0.6 +0.1
carbon source Ying_Nucleobase14 rep C; time point 1 -0.6 N.D. -0.7 +0.2 -0.2
carbon source Ying_sugar7 rep C; time point 1 -0.1 N.D. -0.2 -0.9 +0.1
carbon source Ying_all64 rep C; time point 1 -0.2 N.D. -0.5 -0.5 +0.2
carbon source Ying_all64 rep B; time point 1 +0.1 N.D. -1.2 +0.2 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.6 N.D. -0.2 -0.1 +0.1
carbon source Ying_Others16 rep B; time point 2 -0.0 N.D. -0.9 +0.1 +0.3
carbon source Ying_sugar7 rep A; time point 1 -0.6 N.D. +0.0 -0.2 +0.2
carbon source Ying_sugar7 rep B; time point 2 +0.1 N.D. -0.8 +0.2 -0.0
carbon source Ying_all64 rep A; time point 2 -0.0 N.D. -0.3 -0.4 +0.3
carbon source Ying_all64 rep B; time point 2 -0.1 N.D. -0.6 +0.2 +0.1
carbon source Ying_Others16 rep B; time point 1 -0.0 N.D. +0.3 -0.7 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.2 N.D. -0.6 +0.3 -0.0
carbon source Ying_sugar7 rep C; time point 2 +0.3 N.D. +0.1 -0.5 -0.0
carbon source Ying_Others16 rep A; time point 1 +0.1 N.D. +0.2 -0.5 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.2 N.D. -0.4 +0.5 +0.1
carbon source Ying_Others16 rep B; time point 3 +0.1 N.D. -0.4 +0.4 -0.0
carbon source Ying_AminoAcid20 rep C; time point 1 +0.1 N.D. -0.4 +0.5 -0.1
carbon source Ying_all64 rep A; time point 3 -0.2 N.D. +0.1 +0.5 +0.1
carbon source Ying_all64 rep B; time point 3 +0.2 N.D. -0.4 +0.6 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.4 N.D. +0.5 +0.4 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 N.D. -0.2 +0.7 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.2 N.D. -0.1 +1.0 +0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.3 N.D. +0.8 +0.2 +0.1
carbon source Ying_all64 rep C; time point 2 -0.4 N.D. +1.0 +0.4 -0.1
carbon source Ying_sugar7 rep B; time point 3 +0.3 N.D. -0.3 +0.7 +0.3
carbon source Ying_Others16 rep A; time point 3 +0.0 N.D. -0.2 +1.1 +0.3
carbon source Ying_all64 rep C; time point 3 -0.0 N.D. +1.6 -0.1 -0.0
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