Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1634 and GFF1635 are separated by 109 nucleotidesGFF1635 and GFF1636 are separated by 56 nucleotidesGFF1636 and GFF1637 are separated by 84 nucleotidesGFF1637 and GFF1638 overlap by 4 nucleotides GFF1634 - Ferrichrome-iron receptor, at 235,898 to 238,288 GFF1634 GFF1635 - Polyketide synthase modules and related proteins, at 238,398 to 256,793 GFF1635 GFF1636 - Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules, at 256,850 to 260,152 GFF1636 GFF1637 - Polyketide synthase modules and related proteins, at 260,237 to 264,835 GFF1637 GFF1638 - Siderophore biosynthesis non-ribosomal peptide synthetase modules, at 264,832 to 268,113 GFF1638
Group Condition GFF1634 GFF1635 GFF1636 GFF1637 GFF1638
complex community Community=arabino-guar; Passage=4 -0.1 +0.0 -0.2 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 +0.0 -0.0 +0.0 -0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 -0.1 -0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.1 -0.2 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 -0.0 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 +0.1 -0.1 -0.4
complex community Community=Locust bean gum; Passage=4 +0.0 +0.1 -0.5 +0.6 -0.4
complex community Community=Kojac gum; Passage=4 +0.3 +0.1 -0.7 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 -0.2 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.0 +0.2 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.0 +0.2 -0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.1 -0.1 +0.2 -0.3
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 -0.4 +0.6 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.0 -0.1 +0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.1 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.0 +0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.0 +0.1 +0.1 -0.2
no phage control no phage control +0.1 +0.0 -0.1 +0.1 +0.1
complex community Community=guar; Passage=4 -0.0 +0.1 -0.1 +0.4 -0.1
complex community Community=guar; Passage=4 +0.1 -0.1 +0.2 -0.2 +0.3
complex community Community=guar; Passage=4 +0.2 +0.1 -0.1 +0.2 -0.2
complex community Community=guar; Passage=4 +0.1 +0.1 -0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.0 +0.1 +0.2 +0.0
no phage control no phage control +0.2 +0.0 -0.0 +0.1 +0.2
no phage control no phage control +0.2 +0.1 +0.2 -0.0 +0.0
phage phage_bap4 +0.1 +0.0 -0.1 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.2 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 +0.0 +0.0 -0.1 +0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.1 +0.1 +0.2
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