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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF1631 and GFF1632 overlap by 4 nucleotides
GFF1632 and GFF1633 are separated by 102 nucleotides
GFF1633 and GFF1634 are separated by 174 nucleotides
GFF1634 and GFF1635 overlap by 4 nucleotides
GFF1631 - hypothetical protein, at 1,659,319 to 1,660,074
GFF1631
GFF1632 - AmpG permease, at 1,660,071 to 1,661,405
GFF1632
GFF1633 - Response regulator receiver protein, at 1,661,508 to 1,661,990
GFF1633
GFF1634 - LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22), at 1,662,165 to 1,663,532
GFF1634
GFF1635 - 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171), at 1,663,529 to 1,664,083
GFF1635
Group
Condition
GFF1631
GFF1632
GFF1633
GFF1634
GFF1635
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.5
+0.2
-0.5
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.1
+0.1
-1.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.2
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.2
-0.2
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.4
-0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
+0.1
-0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
-0.3
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.1
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.0
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
+0.0
+0.2
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
+0.3
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.2
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
+0.0
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.5
-0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.2
-0.0
+0.1
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