Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1628 and GFF1629 are separated by 177 nucleotidesGFF1629 and GFF1630 are separated by 65 nucleotidesGFF1630 and GFF1631 overlap by 19 nucleotidesGFF1631 and GFF1632 are separated by 136 nucleotides GFF1628 - no description, at 229,309 to 229,548 GFF1628 GFF1629 - Ferric reductase (1.6.99.14), at 229,726 to 230,478 GFF1629 GFF1630 - Esterase/lipase, at 230,544 to 232,628 GFF1630 GFF1631 - L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) protein, at 232,610 to 233,926 GFF1631 GFF1632 - RNA polymerase ECF-type sigma factor, at 234,063 to 234,695 GFF1632
Group Condition GFF1628 GFF1629 GFF1630 GFF1631 GFF1632
complex community Community=Locust bean gum; Passage=4 N.D. -3.6 -0.0 -1.0 -2.3
complex community Community=Locust bean gum; Passage=4 N.D. -2.1 +0.0 -0.8 -2.5
complex community Community=guar; Passage=4 N.D. -0.1 +0.0 +0.2 -2.6
complex community Community=arabino-guar; Passage=4 N.D. -0.6 -0.6 -0.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 -0.2 -0.4 -0.6
complex community Community=Locust bean gum; Passage=4 N.D. +0.7 +0.2 -0.1 -2.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.2 +0.4 -1.4
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +0.3 +0.2 -1.3
complex community Community=guar; Passage=4 N.D. +0.1 +0.1 -0.7 -0.5
complex community Community=guar; Passage=4 N.D. -0.2 +0.2 -1.1 +0.4
vitamin M9 with Supernatant from Cyptococcus N.D. +0.8 -0.1 -0.8 -0.4
complex community Community=Kojac gum; Passage=4 N.D. -0.8 -0.5 +0.8 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.8 -0.4 -0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.9 +0.0 +0.2 -1.5
vitamin M9 with Supernatant from Cyptococcus N.D. +0.7 -0.4 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.5 -0.3 +0.4 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.8 -0.1 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.7 +0.0 +0.3 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +1.0 +0.1 -0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.9 +0.0 +0.3 -0.7
complex community Community=arabino-guar; Passage=4 N.D. +0.7 -0.5 +0.5 +0.2
phage phage_bap4 N.D. +0.6 +0.1 +1.0 -0.6
phage phage_bap4 N.D. +0.4 -0.0 +1.1 -0.5
phage phage_bap4 N.D. -0.2 -0.2 +0.7 +0.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.9 -0.3 +0.2 +0.4
complex community Community=arabino-guar; Passage=4 N.D. +1.2 +0.6 -0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.4 +0.1 +0.0 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.6 -0.1 +0.3 +0.5
phage phage_bap4 N.D. +0.7 -0.1 +1.2 -0.4
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 +0.1 +0.7 +1.6
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