Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_08230	PS417_08235	PS417_08240	PS417_08245	PS417_08250
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.6	N.D.	N.D.	-5.0	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.6	N.D.	N.D.	-5.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.5	N.D.	N.D.	-5.0	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.4	N.D.	N.D.	-3.1	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-4.2	N.D.	N.D.	-5.2	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-4.0	N.D.	N.D.	-5.1	+0.0
supernatant control	Vogels_fungal_media 0.1X	-3.5	N.D.	N.D.	-5.6	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-4.2	N.D.	N.D.	-3.4	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-3.3	N.D.	N.D.	-4.7	+0.2
agar plate interaction control	Taped volatile agar plate with no fungus	-3.6	N.D.	N.D.	-4.3	+0.1
stress	Polymyxin B sulfate 0.006 mg/ml	-4.0	N.D.	N.D.	-3.3	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	N.D.	N.D.	-4.8	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.4	N.D.	N.D.	-1.3	-0.6
carbon source	D-Galacturonic Acid (C)	-3.0	N.D.	N.D.	-3.6	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	N.D.	N.D.	-5.1	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.6	N.D.	N.D.	-1.6	-1.7
soil	soil sample 7; outgrowth in LB	-1.1	N.D.	N.D.	-5.0	-0.4
carbon source	Gly-Glu (C)	-4.2	N.D.	N.D.	-1.8	-0.4
soil	soil sample 3; outgrowth in LB	-4.9	N.D.	N.D.	-1.3	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.0	N.D.	N.D.	-5.0	+0.7
carbon source	L-Citrulline (C)	-2.3	N.D.	N.D.	-3.9	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.5	N.D.	N.D.	-2.4	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.3	N.D.	N.D.	-2.0	-0.6
stress	Nalidixic 0.025 mg/ml	+2.4	N.D.	N.D.	+2.5	+0.9
solid stress	Fraxetin 3 mM; solid stress	+2.9	N.D.	N.D.	+1.7	+1.2
stress	Tetracycline 0.001 mg/ml	+3.1	N.D.	N.D.	+3.5	+0.5
phage	Wcs_1	+3.3	N.D.	N.D.	+2.2	+2.8
stress	Neomycin 0.04 mg/ml	+4.3	N.D.	N.D.	+4.7	+0.4
stress	Gentamicin 0.008 mg/ml	+4.4	N.D.	N.D.	+3.9	+1.5
stress	Doxycycline hyclate 0.001 mg/ml	+6.7	N.D.	N.D.	+6.6	+1.6