Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_08195 and PS417_08200 overlap by 8 nucleotidesPS417_08200 and PS417_08205 are separated by 42 nucleotidesPS417_08205 and PS417_08210 are separated by 43 nucleotidesPS417_08210 and PS417_08215 overlap by 4 nucleotides PS417_08195: PS417_08195 - hypothetical protein, at 1,795,576 to 1,796,793 _08195 PS417_08200: PS417_08200 - hypothetical protein, at 1,796,786 to 1,797,583 _08200 PS417_08205: PS417_08205 - acetyltransferase, at 1,797,626 to 1,798,270 _08205 PS417_08210: PS417_08210 - transferase, at 1,798,314 to 1,799,294 _08210 PS417_08215: PS417_08215 - flippase, at 1,799,291 to 1,800,601 _08215
Group Condition PS417_08195 PS417_08200 PS417_08205 PS417_08210 PS417_08215
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.2 -4.4 -3.4 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.9 -4.4 -3.6 N.D. N.D.
stress Polymyxin B sulfate 0.006 mg/ml -3.7 -2.5 -4.3 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.0 -2.9 -2.2 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.0 -2.8 -3.0 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.6 -3.4 -2.8 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.6 -2.8 -3.4 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -3.4 -3.1 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.8 -2.2 -1.6 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.8 -0.5 -2.6 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -2.7 -1.5 -2.7 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.6 -2.3 -0.6 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -2.5 -1.6 -2.4 N.D. N.D.
stress Benzalkonium Chloride 0.012 mg/ml -2.4 -1.7 -2.3 N.D. N.D.
carbon source D-Glucose-6-Phosphate (C) -2.1 -2.1 -2.0 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.2 -0.3 -2.5 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -1.8 -1.6 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -2.2 -1.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -2.3 -2.0 N.D. N.D.
carbon source Putrescine (C) -2.4 -2.1 -1.3 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.1 -2.6 N.D. N.D.
carbon source D-Glucose-6-Phosphate (C) -1.9 -2.0 -1.8 N.D. N.D.
stress methylglyoxal 0.032 vol% +1.7 +2.3 +2.2 N.D. N.D.
stress Nalidixic 0.025 mg/ml +2.1 +2.0 +2.2 N.D. N.D.
solid stress Fraxetin 3 mM; solid stress +2.1 +2.5 +1.9 N.D. N.D.
stress Tetracycline 0.001 mg/ml +2.5 +2.1 +2.9 N.D. N.D.
phage Wcs_1 +2.9 +2.9 +2.9 N.D. N.D.
stress Gentamicin 0.008 mg/ml +2.8 +3.7 +3.6 N.D. N.D.
stress Neomycin 0.04 mg/ml +4.6 +4.0 +4.5 N.D. N.D.
stress Doxycycline hyclate 0.001 mg/ml +5.4 +4.8 +5.3 N.D. N.D.
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PS417_08210
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