Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_08180	PS417_08185	PS417_08190	PS417_08195	PS417_08200
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	-2.6	-3.1	-3.6	-3.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	-2.3	-3.1	-2.9	-4.4
stress	Polymyxin B sulfate 0.006 mg/ml	-2.1	-2.8	-2.5	-3.7	-2.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-2.6	-2.7	-3.2	-4.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-2.4	-2.8	-3.6	-2.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-1.8	-3.2	-4.0	-2.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-3.7	-0.8	-4.8	-2.2
soil	soil sample 3; outgrowth in LB	-1.0	-4.5	-2.1	-1.2	-2.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-2.5	-3.1	-4.8	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-1.1	-1.1	-5.0	-2.9
supernatant control	Vogels_fungal_media 0.1X	-0.8	-3.1	-2.6	-2.7	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-2.1	-1.7	-2.7	-3.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-4.1	-2.4	-2.9	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.9	-2.8	-3.6	-2.3
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.7	-3.4	-2.9	-2.5	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-1.6	-2.8	-2.7	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-1.8	-2.1	-2.2	-2.2
supernatant control	Vogels_fungal_media 0.1X	-0.2	-2.9	-2.6	-1.8	-1.4
stress	LB_noSalt with Chloride 500 mM	-0.7	-2.7	-2.6	-1.5	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-2.8	-1.8	-3.1	+0.0
solid stress	Fraxetin 3 mM; solid stress	-0.3	+1.7	+2.4	+2.1	+2.5
stress	methylglyoxal 0.032 vol%	+1.3	+1.8	+2.1	+1.7	+2.3
ecofab	LB in EcoFAB_3.5mL	+1.5	+3.8	+2.4	+1.3	+1.8
soil	soil sample 8; outgrowth in LB	+0.1	+3.1	+3.8	+2.3	+1.8
stress	Nalidixic 0.025 mg/ml	+1.6	+2.5	+2.9	+2.1	+2.0
stress	Tetracycline 0.001 mg/ml	+2.1	+2.7	+2.8	+2.5	+2.1
phage	Wcs_1	+2.9	+2.8	+2.9	+2.9	+2.9
stress	Gentamicin 0.008 mg/ml	+3.4	+5.6	+6.3	+2.8	+3.7
stress	Neomycin 0.04 mg/ml	+4.2	+4.6	+5.1	+4.6	+4.0
stress	Doxycycline hyclate 0.001 mg/ml	+4.4	+6.7	+7.0	+5.4	+4.8