Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1604 and GFF1605 are separated by 108 nucleotidesGFF1605 and GFF1606 are separated by 3 nucleotidesGFF1606 and GFF1607 are separated by 92 nucleotidesGFF1607 and GFF1608 are separated by 53 nucleotides GFF1604 - Prolidase (EC 3.4.13.9), at 201,731 to 202,996 GFF1604 GFF1605 - no description, at 203,105 to 203,686 GFF1605 GFF1606 - Cys-tRNA(Pro) deacylase YbaK, at 203,690 to 205,276 GFF1606 GFF1607 - D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2), at 205,369 to 206,814 GFF1607 GFF1608 - Aminotransferase, class III, at 206,868 to 208,232 GFF1608
Group Condition GFF1604 GFF1605 GFF1606 GFF1607 GFF1608
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.4 -0.1 -0.3 +0.0
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 -0.5 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.1 -0.2 -0.4 +0.0
complex community Community=Locust bean gum; Passage=4 +0.1 +0.3 -0.3 -0.0 -0.5
phage phage_bap4 +0.1 -0.1 -0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.2 -0.2 -0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 +0.1 -0.4 +0.2
complex community Community=guar; Passage=4 +0.1 -0.8 +0.2 +0.7 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.3 -0.4 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.4 +0.0 -0.3 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.2 -0.1 -0.2 -0.0
phage phage_bap4 -0.2 +0.3 -0.0 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.2 -0.8 +0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.1 -0.1 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.5 +0.2 -0.2 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.3 +0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.1 +0.0 -0.2 +0.1
complex community Community=Kojac gum; Passage=1 +0.2 +0.2 -0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 -0.0 -0.2 +0.2
no phage control no phage control -0.2 +0.4 +0.2 +0.1 +0.0
phage phage_bap4 -0.2 +0.1 +0.1 +0.3 +0.3
complex community Community=guar; Passage=4 -0.1 +0.3 -0.0 +0.5 +0.0
complex community Community=Locust bean gum; Passage=4 +0.2 +0.7 -0.3 -0.1 +0.2
complex community Community=guar; Passage=4 +0.2 +0.1 +0.2 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.3 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.7 -0.3 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.6 +0.0 +0.1 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 +0.0 +0.1 +0.3 +0.5 +0.0
complex community Community=Kojac gum; Passage=4 -0.2 +0.3 +0.4 +0.0 +0.5
complex community Community=guar; Passage=4 +0.8 +0.3 +0.4 +0.6 -0.5
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