Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_08135	PS417_08140	PS417_08145	PS417_08150	PS417_08155
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8	N.D.	N.D.	-0.8	-5.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.2	N.D.	N.D.	-0.2	-5.1
soil	soil sample 3; outgrowth in LB	-3.6	N.D.	N.D.	-0.4	-4.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.0	N.D.	N.D.	+0.1	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-3.2	N.D.	N.D.	-0.1	-4.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.3	N.D.	N.D.	+0.8	-4.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	N.D.	N.D.	-0.4	-5.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4	N.D.	N.D.	-0.7	-4.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-3.2	N.D.	N.D.	-0.7	-3.0
seeds	Growth on radish seeds for 72 hours	-2.4	N.D.	N.D.	-2.3	-2.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.5	N.D.	N.D.	-0.6	-3.7
soil	soil sample 2; outgrowth in LB	-3.6	N.D.	N.D.	-0.1	-2.7
soil	soil sample 7; outgrowth in LB	-3.3	N.D.	N.D.	+0.5	-3.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	-3.0	N.D.	N.D.	-0.5	-2.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7	N.D.	N.D.	+0.4	-4.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.9	N.D.	N.D.	+0.1	-3.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.8	N.D.	N.D.	-0.3	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.4	N.D.	N.D.	-0.3	-2.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	-3.0	N.D.	N.D.	+0.4	-3.3
supernatant control	Vogels_fungal_media 0.1X	-1.4	N.D.	N.D.	+0.3	-4.6
soil	soil sample 5; outgrowth in LB	-4.2	N.D.	N.D.	-0.6	-0.8
rhizosphere	rhizosphere sample 1; outgrowth in LB	-3.9	N.D.	N.D.	+0.4	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.0	N.D.	N.D.	+0.3	-2.2
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.3	N.D.	N.D.	+0.5	-4.8
agar plate interaction control	Taped volatile agar plate with no fungus	-2.6	N.D.	N.D.	+0.8	-2.5
carbon source	Carbon source D-Mannitol 5 mM	+0.4	N.D.	N.D.	+0.7	-5.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.5	N.D.	N.D.	+1.2	-1.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7	N.D.	N.D.	+1.2	-4.0
stress	Doxycycline hyclate 0.001 mg/ml	+1.6	N.D.	N.D.	+1.5	+3.5
stress	Gentamicin 0.008 mg/ml	-0.8	N.D.	N.D.	+1.6	+6.8