Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1589 and GFF1590 are separated by 172 nucleotidesGFF1590 and GFF1591 are separated by 98 nucleotidesGFF1591 and GFF1592 are separated by 46 nucleotidesGFF1592 and GFF1593 are separated by 378 nucleotides GFF1589 - (Y14336) putative extracellular protein containing predicted 35aa signal peptide, at 444,014 to 444,988 GFF1589 GFF1590 - Transcriptional regulator, AraC family, at 445,161 to 446,120 GFF1590 GFF1591 - Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82), at 446,219 to 447,259 GFF1591 GFF1592 - putative exported protein, at 447,306 to 448,211 GFF1592 GFF1593 - hypothetical protein, at 448,590 to 449,189 GFF1593
Group Condition GFF1589 GFF1590 GFF1591 GFF1592 GFF1593
carbon source Ying_Others16 rep C; time point 3 -0.3 -0.7 +0.1 N.D. -1.2
carbon source Ying_Others16 rep A; time point 3 -0.4 -0.5 -0.2 N.D. -0.7
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 -0.6 +0.0 N.D. -0.7
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.2 -0.1 +0.1 N.D. -1.0
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.5 -0.0 -0.0 N.D. -0.7
carbon source Ying_AminoAcid20 rep B; time point 3 -0.2 -0.2 +0.0 N.D. -0.8
carbon source Ying_AminoAcid20 rep A; time point 3 -0.2 -0.3 +0.0 N.D. -0.5
carbon source Ying_sugar7 rep B; time point 3 -0.4 -0.0 +0.1 N.D. -0.6
carbon source Ying_all64 rep A; time point 3 -0.3 -0.3 +0.2 N.D. -0.6
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.0 +0.1 -0.3 N.D. -0.8
carbon source Ying_sugar7 rep A; time point 3 -0.3 -0.3 +0.1 N.D. -0.5
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 -0.3 -0.1 N.D. -0.4
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.6 +0.0 +0.3 N.D. -0.3
carbon source Ying_Nucleobase14 rep A; time point 2 -0.1 +0.3 +0.1 N.D. -0.9
carbon source Ying_Nucleobase14 rep B; time point 2 -0.0 +0.3 -0.1 N.D. -0.7
carbon source Ying_sugar7 rep C; time point 3 -0.3 +0.2 +0.1 N.D. -0.6
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.1 +0.4 -0.1 N.D. -0.6
carbon source Ying_AminoAcid20 rep B; time point 1 +0.2 +0.1 -0.1 N.D. -0.5
carbon source Ying_all64 rep C; time point 1 -0.2 +0.3 +0.1 N.D. -0.5
carbon source Ying_Others16 rep B; time point 1 -0.1 +0.4 -0.3 N.D. -0.3
carbon source Ying_sugar7 rep B; time point 2 +0.1 +0.0 +0.2 N.D. -0.6
carbon source Ying_Others16 rep A; time point 1 -0.0 +0.2 +0.2 N.D. -0.5
carbon source Ying_Others16 rep B; time point 2 +0.1 +0.2 +0.3 N.D. -0.7
carbon source Ying_all64 rep C; time point 3 +0.0 +0.8 +0.2 N.D. -1.1
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 +0.3 +0.0 N.D. -0.5
carbon source Ying_Others16 rep C; time point 1 -0.0 +0.4 +0.2 N.D. -0.5
carbon source Ying_Nucleobase14 rep C; time point 1 +0.3 +0.4 +0.2 N.D. -0.4
carbon source Ying_Others16 rep A; time point 2 +0.2 +0.4 +0.2 N.D. +0.1
carbon source Ying_all64 rep C; time point 2 +0.2 +0.8 +0.4 N.D. -0.3
carbon source Ying_sugar7 rep C; time point 1 +0.2 +0.4 +0.5 N.D. +0.1
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