Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1581 and GFF1582 are separated by 20 nucleotidesGFF1582 and GFF1583 are separated by 22 nucleotidesGFF1583 and GFF1584 are separated by 6 nucleotidesGFF1584 and GFF1585 are separated by 172 nucleotides GFF1581 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52), at 180,365 to 181,114 GFF1581 GFF1582 - BUG/TctC family periplasmic protein, at 181,135 to 182,139 GFF1582 GFF1583 - Fumarate hydratase class I, beta region (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32), at 182,162 to 182,779 GFF1583 GFF1584 - Fumarate hydratase class I, alpha region (EC 4.2.1.2); L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32), at 182,786 to 183,658 GFF1584 GFF1585 - Outer membrane porin protein 32 precursor, at 183,831 to 185,048 GFF1585
Group Condition GFF1581 GFF1582 GFF1583 GFF1584 GFF1585
complex community Community=guar; Passage=4 N.D. -1.0 -0.9 -0.3 +0.0
complex community Community=arabino-guar; Passage=4 N.D. -1.5 -0.7 +0.0 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.6 -0.7 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -1.3 -0.6 +0.0 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 -0.3 -0.7 +0.1
complex community Community=guar; Passage=4 N.D. -0.1 -1.5 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 -0.6 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.4 +0.2 -0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.2 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -0.2 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.5 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.6 +0.3 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.6 +0.1 +0.2 +0.1
phage phage_bap4 N.D. -0.4 +0.1 +0.2 -0.1
complex community Community=Kojac gum; Passage=1 N.D. +0.2 -0.4 +0.2 -0.1
complex community Community=guar; Passage=4 N.D. +0.4 -0.5 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 +0.3 +0.0 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.3 +0.8 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.4 +0.2 -0.1 -0.3
phage phage_bap4 N.D. +0.4 -0.3 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.3 +0.4 +0.3
phage phage_bap4 N.D. -0.2 +0.3 +0.3 -0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.8 +0.4 -0.4 -0.3
phage phage_bap4 N.D. -0.2 +0.4 +0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.7 -0.0 +0.1 -0.0
complex community Community=Kojac gum; Passage=4 N.D. +1.1 +0.5 -0.9 +0.1
phage phage_bap4 N.D. +0.6 +0.0 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.4 +0.3 +0.3 +0.1
complex community Community=guar; Passage=4 N.D. +0.7 +0.3 +0.5 -0.1
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