Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1580 and GFF1581 overlap by 8 nucleotidesGFF1581 and GFF1582 are separated by 135 nucleotidesGFF1582 and GFF1583 are separated by 79 nucleotidesGFF1583 and GFF1584 are separated by 149 nucleotides GFF1580 - Transcriptional regulator, LysR family, at 434,952 to 435,854 GFF1580 GFF1581 - hypothetical protein, at 435,847 to 437,343 GFF1581 GFF1582 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 437,479 to 439,131 GFF1582 GFF1583 - Nodulation protein D (transcriptional regulator, LysR family), at 439,211 to 440,122 GFF1583 GFF1584 - Transcriptional regulator, AraC family, at 440,272 to 441,270 GFF1584
Group Condition GFF1580 GFF1581 GFF1582 GFF1583 GFF1584
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. -0.3 -0.7 +0.3 -0.4
carbon source Ying_Others16 rep A; time point 2 N.D. -0.1 -0.2 -0.4 +0.0
carbon source Ying_sugar7 rep C; time point 1 N.D. -0.2 -0.2 -0.0 -0.2
carbon source Ying_Others16 rep B; time point 2 N.D. -0.1 -0.1 -0.3 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. +0.0 -0.5 -0.1 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. -0.3 -0.4 +0.4 -0.1
carbon source Ying_all64 rep C; time point 1 N.D. -0.1 -0.5 +0.1 +0.1
carbon source Ying_AminoAcid20 rep B; time point 1 N.D. -0.2 -0.2 +0.3 -0.1
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. -0.2 -0.1 +0.2 -0.0
carbon source Ying_sugar7 rep B; time point 1 N.D. -0.1 -0.4 +0.2 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +0.3 -0.0 -0.4 -0.1
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. +0.1 -0.3 +0.3 -0.2
carbon source Ying_Others16 rep B; time point 3 N.D. +0.3 -0.6 +0.2 -0.0
carbon source Ying_AminoAcid20 rep C; time point 1 N.D. -0.0 -0.5 +0.3 +0.1
carbon source Ying_all64 rep A; time point 3 N.D. +0.3 -0.5 +0.0 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. +0.3 -0.4 +0.1 +0.0
carbon source Ying_sugar7 rep C; time point 3 N.D. +0.4 -0.1 -0.1 -0.1
carbon source Ying_Nucleobase14 rep A; time point 1 N.D. +0.0 +0.1 +0.4 -0.2
carbon source Ying_all64 rep B; time point 3 N.D. +0.2 +0.2 -0.2 +0.0
carbon source Ying_Others16 rep C; time point 1 N.D. -0.2 +0.1 +0.2 +0.2
carbon source Ying_Nucleobase14 rep B; time point 2 N.D. -0.0 +0.1 +0.3 -0.2
carbon source Ying_all64 rep B; time point 2 N.D. -0.1 +0.1 +0.3 -0.1
carbon source Ying_sugar7 rep C; time point 2 N.D. +0.1 +0.2 +0.2 -0.2
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. +0.4 -0.6 +0.4 +0.1
carbon source Ying_Others16 rep A; time point 3 N.D. +0.4 +0.0 -0.1 +0.0
carbon source Ying_all64 rep A; time point 2 N.D. +0.1 +0.2 -0.1 +0.2
carbon source Ying_all64 rep C; time point 2 N.D. +0.2 +0.0 +0.2 +0.1
carbon source Ying_sugar7 rep A; time point 3 N.D. +0.4 +0.1 +0.0 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. +0.3 +0.1 +0.1 +0.1
carbon source Ying_all64 rep C; time point 3 N.D. +0.7 +0.1 -0.5 +0.6
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