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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1578 and GFF1579 are separated by 161 nucleotides
GFF1579 and GFF1580 are separated by 83 nucleotides
GFF1580 and GFF1581 are separated by 85 nucleotides
GFF1581 and GFF1582 are separated by 14 nucleotides
GFF1578 - FIG01219827: hypothetical protein, at 36,991 to 37,341
GFF1578
GFF1579 - FIG00638140: hypothetical protein, at 37,503 to 37,829
GFF1579
GFF1580 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 37,913 to 39,247
GFF1580
GFF1581 - 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein, at 39,333 to 39,767
GFF1581
GFF1582 - FIG01046421: hypothetical protein, at 39,782 to 39,940
GFF1582
Group
Condition
GFF1578
GFF1579
GFF1580
GFF1581
GFF1582
phage
6F2_phage 15 MOI
-0.7
-0.2
+0.0
-0.4
N.D.
phage
Br60_phage 15 MOI
-0.3
-0.9
-0.0
+0.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.3
+0.3
+0.2
-1.3
N.D.
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+0.2
-0.0
-0.2
-1.0
N.D.
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
-0.3
-0.1
-0.2
-0.3
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-0.0
-0.2
+0.2
-0.8
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
+0.2
-0.4
-0.2
-0.3
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
-0.2
+0.1
-0.8
N.D.
phage
6F2_phage 15 MOI
-0.3
-0.6
-0.1
+0.6
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.3
-0.1
-0.2
-0.3
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.5
-1.2
-0.2
+0.6
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-0.6
-0.0
-0.2
+0.5
N.D.
phage
phi19h1_phage 15 MOI
-0.2
-0.4
-0.0
+0.4
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
+0.1
-0.6
+0.2
+0.2
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.1
+0.4
+0.1
-0.6
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-2
-0.0
+0.5
-0.0
-0.4
N.D.
micoeukaryotes
C.elegans, mixed culture-1
-0.1
+0.2
-0.3
+0.3
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.4
+0.2
-0.0
-0.5
N.D.
phage
Ffm_phage 10 MOI; agar plate assay
-0.4
+0.7
+0.3
-0.5
N.D.
nophagecontrol
No phage control
-0.5
+0.2
+0.1
+0.4
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.4
+0.1
+0.1
-0.3
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.5
-0.2
+0.3
-0.3
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.5
+0.2
-0.0
-0.4
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
+0.1
+0.4
-0.3
+0.1
N.D.
phage
phi19h1_phage 15 MOI
-0.1
+0.0
-0.1
+0.7
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.5
-1.0
+0.1
+1.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.1
+0.6
+0.1
-0.1
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+0.2
+0.5
-0.2
+0.3
N.D.
phage
phi19h1_phage 15 MOI
-0.1
-0.2
+0.3
+1.1
N.D.
phage
6H2_phage 10 MOI; agar plate assay
+0.4
+0.8
+0.6
-0.0
N.D.
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