Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF1554 and GFF1555 are separated by 25 nucleotidesGFF1555 and GFF1556 are separated by 13 nucleotidesGFF1556 and GFF1557 are separated by 31 nucleotidesGFF1557 and GFF1558 are separated by 10 nucleotides GFF1554 - Ornithine cyclodeaminase (EC 4.3.1.12), at 409,299 to 410,318 GFF1554 GFF1555 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 410,344 to 411,363 GFF1555 GFF1556 - Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16), at 411,377 to 412,846 GFF1556 GFF1557 - Tricarboxylate transport protein TctC, at 412,878 to 413,852 GFF1557 GFF1558 - FIG00954108: hypothetical protein, at 413,863 to 414,441 GFF1558
Group Condition GFF1554 GFF1555 GFF1556 GFF1557 GFF1558
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.1 +0.0 -0.4 -0.3 N.D.
carbon source Ying_AminoAcid20 rep C; time point 1 -0.2 +0.1 -0.3 -0.4 N.D.
carbon source Ying_all64 rep A; time point 3 -0.5 -0.1 +0.1 -0.3 N.D.
carbon source Ying_Nucleobase14 rep B; time point 1 +0.2 +0.1 -0.3 -0.4 N.D.
carbon source Ying_all64 rep B; time point 3 +0.3 +0.2 -0.1 -0.5 N.D.
carbon source Ying_all64 rep A; time point 1 +0.1 +0.2 -0.2 -0.3 N.D.
carbon source Ying_all64 rep C; time point 3 +0.2 +0.4 -0.7 +0.0 N.D.
carbon source Ying_Others16 rep A; time point 1 -0.4 +0.0 +0.4 -0.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +0.4 +0.1 -0.3 -0.3 N.D.
carbon source Ying_Others16 rep C; time point 3 -0.2 +0.2 +0.3 -0.3 N.D.
carbon source Ying_Others16 rep C; time point 1 +0.2 -0.1 +0.2 -0.4 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -0.1 +0.1 +0.3 -0.3 N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 -0.0 +0.1 +0.2 -0.3 N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 +0.3 +0.1 -0.0 -0.3 N.D.
carbon source Ying_AminoAcid20 rep A; time point 1 +0.2 -0.1 +0.2 -0.2 N.D.
carbon source Ying_Nucleobase14 rep A; time point 2 -0.5 +0.1 +0.6 -0.2 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.1 +0.1 +0.4 -0.2 N.D.
carbon source Ying_sugar7 rep C; time point 3 +0.0 -0.0 +0.4 -0.3 N.D.
carbon source Ying_Nucleobase14 rep B; time point 2 +0.2 +0.3 -0.4 +0.1 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.2 +0.1 +0.7 -0.3 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.0 +0.3 +0.3 -0.3 N.D.
carbon source Ying_sugar7 rep A; time point 3 -0.2 +0.3 +0.6 -0.4 N.D.
carbon source Ying_sugar7 rep B; time point 3 +0.1 +0.1 +0.5 -0.3 N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 +0.4 +0.3 -0.1 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 +0.2 +0.2 +0.2 -0.1 N.D.
carbon source Ying_Others16 rep B; time point 1 -0.1 +0.4 +0.4 -0.3 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.0 +0.5 -0.1 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 +0.2 +0.5 -0.1 N.D.
carbon source Ying_Nucleobase14 rep C; time point 1 +0.1 +0.1 +0.6 -0.0 N.D.
carbon source Ying_sugar7 rep C; time point 1 +0.4 +0.3 +0.2 -0.2 N.D.
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