Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF152 and GFF153 overlap by 4 nucleotidesGFF153 and GFF154 overlap by 4 nucleotidesGFF154 and GFF155 are separated by 33 nucleotidesGFF155 and GFF156 are separated by 16 nucleotides GFF152 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 179,734 to 180,678 GFF152 GFF153 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 180,675 to 181,511 GFF153 GFF154 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 181,508 to 183,178 GFF154 GFF155 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 183,212 to 184,783 GFF155 GFF156 - Glycosyl transferase, group 2 family, at 184,800 to 185,498 GFF156
Group Condition GFF152 GFF153 GFF154 GFF155 GFF156
complex community Community=Kojac gum; Passage=4 -0.4 -0.1 -0.5 -0.1 -3.0
complex community Community=Locust bean gum; Passage=4 -0.5 -0.5 -0.2 -0.3 -1.1
phage phage_bap4 -0.2 -0.1 +0.0 +0.0 -1.1
complex community Community=arabino-guar; Passage=4 -0.4 -0.8 +0.4 -0.2 -0.1
phage phage_bap4 +0.1 -0.3 -0.4 +0.0 -0.5
complex community Community=arabino-guar; Passage=4 -0.5 +0.5 -0.3 -0.0 -0.8
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 -0.4 -0.1 -0.9
phage phage_bap4 +0.1 -0.2 -0.4 -0.1 -0.4
complex community Community=guar; Passage=4 +0.0 -0.3 +0.0 +0.1 -0.7
no phage control no phage control -0.0 -0.2 +0.1 -0.1 -0.5
phage phage_bap4 +0.1 -0.3 +0.2 +0.1 -0.8
phage phage_bap4 -0.1 -0.3 +0.0 +0.1 -0.4
phage phage_bap4 +0.1 -0.4 +0.1 +0.1 -0.5
phage phage_bap4 -0.4 -0.1 -0.2 -0.1 +0.1
phage phage_bap4 +0.2 +0.1 -0.2 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 -0.2 +0.2 +0.1
no phage control no phage control +0.0 +0.1 +0.2 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.2 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 -0.2 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 -0.3 +0.3 +0.3 -0.2 -0.1
complex community Community=Locust bean gum; Passage=1 -0.4 +0.3 -0.2 -0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.2 -0.0 +0.4
complex community Community=guar; Passage=4 -0.8 +0.4 -0.2 -0.0 +0.7
complex community Community=arabino-guar; Passage=4 -0.3 +0.3 -0.5 +0.2 +0.6
complex community Community=guar; Passage=4 -0.2 -0.3 +0.6 +0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 -0.1 -0.0 +0.6
complex community Community=guar; Passage=4 -0.2 +0.5 -0.2 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.0 +0.1 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.2 -0.1 +0.0 +0.5
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.2 +0.3 +0.3
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