Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_00065	PS417_00070	PS417_00075	PS417_00080	PS417_00085
phage	JP1 MOI 10	-2.7	N.D.	+0.1	-2.9	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2	N.D.	-1.1	-0.7	-2.7
phage	P. simiae Grant Run MOI 10	-1.5	N.D.	-0.6	-2.0	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	N.D.	-2.0	-0.7	-0.7
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-2.0	N.D.	+0.1	-0.4	-2.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	N.D.	-1.6	-1.1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3	N.D.	-0.6	-0.8	-1.1
phage	P. simiae OR Antrim MOI 1	-0.4	N.D.	-1.2	-1.1	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	N.D.	-1.3	-0.8	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	N.D.	-1.6	-0.9	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.0	N.D.	-0.7	-0.5	-0.0
phage	P. simiae OR Antrim MOI 10	-1.5	N.D.	-0.4	-1.3	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	N.D.	-0.4	-0.4	-2.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1	N.D.	-0.8	-0.4	-2.6
phage	JP1 MOI 0.1	-0.9	N.D.	-1.0	-1.1	+0.2
nophagecontrol	Only library	-0.6	N.D.	-1.0	+0.3	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	N.D.	-0.5	-0.5	-2.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	N.D.	-1.0	-0.8	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.3	N.D.	+0.5	-0.5	-1.3
stress	Thallium(I) acetate 0.0625 mg/ml	-0.2	N.D.	-2.0	-0.9	+0.5
stress	Gentamicin 0.008 mg/ml	-0.1	N.D.	+0.4	-2.6	-0.3
solid stress	Fraxetin 3 mM; solid stress	+0.2	N.D.	-1.3	-1.4	+0.3
stress	Paraquat dichloride 0.002 mg/ml	-0.1	N.D.	-1.5	-1.0	+0.7
phage	P. simiae ORA MOI 0.1	+0.0	N.D.	-0.4	-2.0	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	N.D.	+1.3	-0.3	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.3	N.D.	-0.4	-0.1	-1.5
phage	JP1 MOI 1	-0.9	N.D.	+0.7	-1.3	+1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.7	N.D.	-0.8	-0.5	-0.4
carbon source	L-Valine (C)	+1.6	N.D.	+1.1	-1.4	-1.1
stress	methylglyoxal 0.032 vol%	-0.5	N.D.	-1.1	+3.0	+0.8