Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_07515 and PS417_07520 are separated by 191 nucleotidesPS417_07520 and PS417_07525 are separated by 134 nucleotidesPS417_07525 and PS417_07530 are separated by 13 nucleotidesPS417_07530 and PS417_07535 are separated by 140 nucleotides PS417_07515: PS417_07515 - aconitate hydratase, at 1,651,324 to 1,654,065 _07515 PS417_07520: PS417_07520 - 23S rRNA methyltransferase, at 1,654,257 to 1,655,333 _07520 PS417_07525: PS417_07525 - sulfurtransferase, at 1,655,468 to 1,655,719 _07525 PS417_07530: PS417_07530 - multidrug transporter, at 1,655,733 to 1,657,127 _07530 PS417_07535: PS417_07535 - erythronate-4-phosphate dehydrogenase, at 1,657,268 to 1,658,410 _07535
Group Condition PS417_07515 PS417_07520 PS417_07525 PS417_07530 PS417_07535
solid stress Fraxetin 3 mM; solid stress -3.7 N.D. N.D. +0.3 N.D.
solid stress Fraxetin 3 mM; solid stress -2.3 N.D. N.D. -0.1 N.D.
stress Cisplatin 0.01 mg/ml +0.0 N.D. N.D. -1.9 N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.8 N.D. N.D. -0.3 N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.8 N.D. N.D. -0.2 N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.9 N.D. N.D. -0.1 N.D.
solid stress Fraxetin 3 mM; solid stress -0.7 N.D. N.D. -0.2 N.D.
solid stress Fraxetin 2 mM; solid stress -0.8 N.D. N.D. -0.1 N.D.
solid stress Fraxetin 1 mM; solid stress -0.6 N.D. N.D. -0.2 N.D.
solid stress 80% Methanol 0.5 mM; solid stress -0.7 N.D. N.D. -0.1 N.D.
solid stress Fraxetin 2 mM; solid stress -0.7 N.D. N.D. -0.1 N.D.
solid stress Fraxetin 2 mM; solid stress -0.6 N.D. N.D. -0.1 N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.7 N.D. N.D. +0.0 N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.6 N.D. N.D. -0.1 N.D.
solid stress Fraxetin 3 mM; solid stress -0.6 N.D. N.D. -0.1 N.D.
seeds Growth on radish seeds for 72 hours -0.1 N.D. N.D. -0.5 N.D.
stress R2A with Fusaric 120 ug/mL -0.3 N.D. N.D. -0.3 N.D.
seeds Growth on radish seeds for 72 hours -0.1 N.D. N.D. -0.5 N.D.
solid stress Fraxetin 1 mM; solid stress -0.6 N.D. N.D. +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 N.D. N.D. +0.0 N.D.
solid stress Fraxetin 2 mM; solid stress -0.6 N.D. N.D. +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.1 N.D. N.D. +0.6 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.1 N.D. N.D. +0.5 N.D.
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. N.D. +0.5 N.D.
root root sample 6; outgrowth in LB -0.1 N.D. N.D. +0.7 N.D.
phage JP1 MOI 10 +0.0 N.D. N.D. +0.6 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 N.D. N.D. +0.4 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 N.D. N.D. +0.8 N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB -0.1 N.D. N.D. +0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 N.D. N.D. +0.6 N.D.
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