Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_07505 and PS417_07510 are separated by 109 nucleotidesPS417_07510 and PS417_07515 are separated by 188 nucleotidesPS417_07515 and PS417_07520 are separated by 191 nucleotidesPS417_07520 and PS417_07525 are separated by 134 nucleotides PS417_07505: PS417_07505 - cysteine synthase, at 1,649,113 to 1,650,087 _07505 PS417_07510: PS417_07510 - aspartyl beta-hydroxylase, at 1,650,197 to 1,651,135 _07510 PS417_07515: PS417_07515 - aconitate hydratase, at 1,651,324 to 1,654,065 _07515 PS417_07520: PS417_07520 - 23S rRNA methyltransferase, at 1,654,257 to 1,655,333 _07520 PS417_07525: PS417_07525 - sulfurtransferase, at 1,655,468 to 1,655,719 _07525
Group Condition PS417_07505 PS417_07510 PS417_07515 PS417_07520 PS417_07525
solid stress Fraxetin 3 mM; solid stress +0.3 -2.2 -3.7 N.D. N.D.
carbon source octanoate (C) -0.1 -3.9 -0.0 N.D. N.D.
carbon source octanoate (C) -0.3 -3.8 +0.1 N.D. N.D.
solid stress Fraxetin 3 mM; solid stress +0.3 -1.8 -2.3 N.D. N.D.
solid stress Fraxetin 3 mM; solid stress +0.1 -2.2 -0.6 N.D. N.D.
stress Doxycycline hyclate 0.001 mg/ml -0.0 -2.5 +0.0 N.D. N.D.
stress Tetracycline 0.001 mg/ml -0.3 -2.1 +0.0 N.D. N.D.
solid stress Fraxetin 3 mM; solid stress -0.2 -1.1 -0.7 N.D. N.D.
stress methylglyoxal 0.032 vol% -0.3 -1.4 -0.2 N.D. N.D.
stress Nalidixic 0.015 mg/ml -0.1 -1.7 -0.0 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 +0.2 N.D. N.D.
stress Nalidixic 0.025 mg/ml +0.2 -2.0 +0.1 N.D. N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.0 -0.8 -0.8 N.D. N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.4 -0.5 -0.7 N.D. N.D.
liquid stress Fraxetin 3 mM; liquid stress -0.1 -0.8 -0.6 N.D. N.D.
phage P. simiae ORA MOI 0.1 -0.5 -1.0 +0.1 N.D. N.D.
solid stress Fraxetin 2 mM; solid stress +0.2 -1.1 -0.5 N.D. N.D.
phage P. simiae ORA MOI 0.1 +0.1 -1.1 -0.2 N.D. N.D.
solid stress 80% Methanol 0.5 mM; solid stress +0.2 -0.5 -0.7 N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 -1.0 +0.2 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 +1.3 +0.0 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 +1.9 -0.1 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.2 +1.9 -0.1 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.1 +1.6 +0.0 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.5 -0.1 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 +2.2 -0.1 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.0 +2.1 +0.0 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.1 +2.2 -0.0 N.D. N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.2 +2.5 -0.0 N.D. N.D.
stress Neomycin 0.04 mg/ml +0.0 +4.3 +0.2 N.D. N.D.
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