Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1470 and GFF1471 are separated by 380 nucleotidesGFF1471 and GFF1472 overlap by 8 nucleotidesGFF1472 and GFF1473 are separated by 42 nucleotidesGFF1473 and GFF1474 are separated by 114 nucleotides GFF1470 - Putative transposase InsK for insertion sequence element IS150, at 61,684 to 61,812 GFF1470 GFF1471 - Uncharacterized MFS-type transporter, at 62,193 to 63,647 GFF1471 GFF1472 - Tricarboxylate transport protein TctC, at 63,640 to 64,608 GFF1472 GFF1473 - Amidase family protein BBta_1912, at 64,651 to 66,060 GFF1473 GFF1474 - Transcriptional regulator, LysR family, at 66,175 to 67,074 GFF1474
Group Condition GFF1470 GFF1471 GFF1472 GFF1473 GFF1474
complex community Community=Locust bean gum; Passage=4 -3.5 +0.5 -0.7 +0.6 -0.5
complex community Community=Kojac gum; Passage=4 -0.2 +0.1 +0.2 -0.3 -2.3
complex community Community=guar; Passage=4 +0.4 +0.6 -0.1 +0.4 -3.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.1 +0.0 +0.1 -1.9
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 -0.2 -0.1 -0.9
complex community Community=arabino-guar; Passage=4 -0.4 -0.0 +0.2 +0.3 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.0 -0.0 +0.2 -1.1
phage phage_bap4 +0.0 -0.2 -0.2 -0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 +0.1 -0.1 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.2 +0.0 +0.1 -1.2
phage phage_bap4 +0.2 -0.2 +0.2 +0.0 -1.0
complex community Community=arabino-guar; Passage=4 +0.3 -0.3 +0.5 -0.8 -0.5
phage phage_bap4 +0.0 -0.2 +0.0 +0.1 -0.6
no phage control no phage control +0.2 -0.1 +0.1 +0.1 -0.9
complex community Community=Locust bean gum; Passage=1 +0.4 +0.1 -0.1 -0.0 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.1 -0.3 +0.1 +0.3
phage phage_bap4 +0.1 -0.1 +0.1 +0.0 -0.5
phage phage_bap4 +0.1 -0.1 +0.2 -0.0 -0.5
complex community Community=Kojac gum; Passage=1 +0.1 +0.1 +0.2 -0.1 -0.6
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 -0.3 +0.6 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.0 -0.3 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.5 -0.1 +0.5 +0.6 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 -0.0 -0.1 +0.6
complex community Community=arabino-guar; Passage=4 -0.7 +0.2 +0.6 +0.4 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 -0.3 -0.1 -0.4 +0.9
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.1 +0.1 +0.2 +0.6
no phage control no phage control +0.4 -0.1 +0.2 -0.3 +0.5
complex community Community=guar; Passage=4 +0.4 +0.1 +0.1 +0.3 +0.2
complex community Community=guar; Passage=4 +0.1 -0.1 +0.5 +0.4 +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.0 +0.7 +0.1 +0.6
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