Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1461 and GFF1462 overlap by 4 nucleotidesGFF1462 and GFF1463 are separated by 51 nucleotidesGFF1463 and GFF1464 are separated by 12 nucleotidesGFF1464 and GFF1465 are separated by 22 nucleotides GFF1461 - Enoyl-CoA hydratase (EC 4.2.1.17), at 52,595 to 53,401 GFF1461 GFF1462 - L-carnitine dehydratase/bile acid-inducible protein F, at 53,398 to 54,600 GFF1462 GFF1463 - Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1), at 54,652 to 55,713 GFF1463 GFF1464 - hypothetical protein, at 55,726 to 57,417 GFF1464 GFF1465 - ABC transporter spermidine/putrescine-binding protein, at 57,440 to 58,489 GFF1465
Group Condition GFF1461 GFF1462 GFF1463 GFF1464 GFF1465
phage phage_bap4 -0.1 +0.0 -0.4 -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 +0.2 -0.9 +0.1
phage phage_bap4 +0.0 +0.1 -0.6 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 +0.1 +0.1 +0.2 -0.1
no phage control no phage control -0.2 +0.2 -0.4 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.3 -0.1 -0.3 -0.2
complex community Community=Locust bean gum; Passage=4 +0.0 +0.3 +0.0 -0.1 -0.5
phage phage_bap4 -0.2 +0.1 -0.1 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.3 -0.2 +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.4 +0.2 -0.6 +0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.3 -0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.1 +0.0 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 +0.1 +0.2 -0.1
phage phage_bap4 -0.1 +0.3 -0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 +0.1 +0.3 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.4 +0.6 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.5 +0.1 -0.5 +0.1
complex community Community=Kojac gum; Passage=4 -1.0 +0.8 -0.3 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 +0.2 -0.3 +0.2 -0.4 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.3 -0.2 +0.1 +0.1
complex community Community=guar; Passage=4 -0.4 -0.0 +0.4 -0.2 +0.3
complex community Community=guar; Passage=4 +0.4 -0.1 +0.0 -0.4 +0.4
complex community Community=arabino-guar; Passage=4 +0.5 +0.5 -0.5 -0.4 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.2 +0.4 -0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.2 +0.1 +0.3 +0.0
complex community Community=guar; Passage=4 -0.3 -0.1 -0.5 +0.5 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.3 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.3 +0.3 +0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.4 +0.2 +0.4 +0.0
complex community Community=Locust bean gum; Passage=4 -0.0 +0.5 +0.4 +0.9 +0.2
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