Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_07265	PS417_07270	PS417_07275	PS417_07280	PS417_07285
carbon source	2-Deoxy-D-Ribose (C)	-4.1	-0.5	-0.1	+0.1	-0.1
carbon source	2-Deoxy-D-Ribose (C)	-4.5	-0.1	-0.1	+0.2	-0.1
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-3.4	-0.2	-0.2	-0.2	-0.2
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-4.1	+0.0	+0.5	+0.0	-0.0
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-3.3	+0.0	+0.0	-0.0	-0.3
carbon source	2-Deoxy-D-Ribose (C)	-2.9	-0.2	-0.1	+0.3	+0.0
carbon source	2-Deoxy-D-Ribose (C)	-3.0	+0.0	+0.1	+0.3	+0.2
carbon source	octanoate (C)	+0.2	-2.2	+0.1	-0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.0	-1.3	-0.8	-0.2
stress	methylglyoxal 0.032 vol%	-0.2	-1.0	-0.3	-0.3	-0.1
carbon source	octanoate (C)	+0.2	-1.7	-0.2	-0.2	+0.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-2.8	+0.1	+0.5	+0.6	+0.1
carbon source	2'-Deoxyinosine 5 mM (C)	-0.9	-0.6	-0.2	+0.1	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.3	-1.2	+0.4	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.5	-0.7	+0.5	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.5	-0.5	-0.6	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	+0.5	-0.5	-0.2	-0.7
phage	JP1 MOI 10	+0.1	-0.6	-0.8	-0.1	+0.4
supernatant control	Vogels_fungal_media 0.1X	+0.0	-0.9	+0.6	-0.2	-0.4
seeds	Growth on radish seeds for 24 hours	+0.1	-0.3	-0.4	+0.9	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	-1.0	-0.1	+0.3	+0.4
phage	P. simiae ORA MOI 0.1	+0.2	-0.6	+0.7	-0.1	-0.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.4	-0.1	+0.6	-0.8	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.3	-1.0	+0.7	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.4	+1.3	-0.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.8	-0.8	+0.6	+0.1
carbon source	L-Glutamine (C)	+0.3	+0.6	+0.5	+0.2	-0.3
seeds	Growth on radish seeds for 72 hours	+0.4	+1.2	-0.2	+0.3	-0.3
seeds	Growth on radish seeds for 72 hours	+0.2	-0.2	+0.4	+1.7	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	+0.9	+0.6	+0.9	+0.1