Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF1425 and GFF1426 are separated by 10 nucleotidesGFF1426 and GFF1427 are separated by 7 nucleotidesGFF1427 and GFF1428 overlap by 4 nucleotidesGFF1428 and GFF1429 are separated by 126 nucleotides GFF1425 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 16,225 to 16,974 GFF1425 GFF1426 - Phenylacetate ABC transporter, ATP-binding protein 2, at 16,985 to 17,704 GFF1426 GFF1427 - Mandelate racemase (EC 5.1.2.2), at 17,712 to 18,788 GFF1427 GFF1428 - no description, at 18,785 to 18,940 GFF1428 GFF1429 - no description, at 19,067 to 19,438 GFF1429
Group Condition GFF1425 GFF1426 GFF1427 GFF1428 GFF1429
complex community Community=Kojac gum; Passage=4 N.D. -0.3 -0.1 N.D. -1.1
complex community Community=arabino-guar; Passage=4 N.D. +0.1 +0.0 N.D. -1.6
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 +0.0 N.D. -1.1
complex community Community=guar; Passage=4 N.D. -1.0 +0.2 N.D. +0.1
phage phage_bap4 N.D. -0.0 +0.2 N.D. -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 +0.1 N.D. -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.1 N.D. -0.7
complex community Community=arabino-guar; Passage=4 N.D. +0.8 -0.4 N.D. -0.8
complex community Community=Locust bean gum; Passage=4 N.D. +0.4 +0.1 N.D. -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.5 +0.1 N.D. -0.9
phage phage_bap4 N.D. -0.2 +0.3 N.D. -0.4
complex community Community=guar; Passage=4 N.D. +0.5 +0.0 N.D. -0.7
phage phage_bap4 N.D. +0.2 +0.3 N.D. -0.6
no phage control no phage control N.D. +0.4 +0.2 N.D. -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.3 +0.4 N.D. -0.6
vitamin M9 with Supernatant from Cyptococcus N.D. +0.9 -0.1 N.D. -0.7
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.5 +0.0 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.6 +0.2 N.D. -0.6
complex community Community=arabino-guar; Passage=4 N.D. +1.1 -0.5 N.D. -0.3
phage phage_bap4 N.D. +0.4 +0.3 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.8 -0.0 N.D. -0.3
complex community Community=guar; Passage=4 N.D. +0.9 +0.2 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.4 -0.1 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.5 -0.0 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.6 +0.1 N.D. +0.2
phage phage_bap4 N.D. +0.6 +0.2 N.D. +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.4 +0.3 N.D. +0.8
complex community Community=Locust bean gum; Passage=4 N.D. +1.6 +0.7 N.D. -0.3
complex community Community=Locust bean gum; Passage=1 N.D. +0.7 +0.1 N.D. +1.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.8 -0.1 N.D. +1.4
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