Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_00705	PS417_00710	PS417_00715	PS417_00720	PS417_00725
carbon source	octanoate (C)	-5.5	-5.1	-3.2	-4.4	-5.2
carbon source	octanoate (C)	-4.4	-5.1	-3.6	-4.1	-5.7
supernatant control	Vogels_fungal_media 0.1X	-5.0	+0.2	-0.2	-0.7	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-3.1	+0.1	-0.4	-1.2	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.4	+0.1	-0.1	+0.3	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.4	-0.2	+0.0	-0.4	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.6	+0.1	+0.1	-0.1	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-2.2	-0.0	-0.1	+0.4	-0.7
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-1.9	-0.0	-0.0	-0.0	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	-0.4	+0.1	-0.6	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-2.6	+0.2	+0.0	+0.2	-0.4
stress	Cisplatin 0.01 mg/ml	-2.3	-0.2	+0.2	+0.1	-0.2
supernatant control	Vogels_fungal_media 0.1X	-1.7	-0.1	-0.3	-0.4	+0.1
phage	JP1 MOI 0.1	-1.2	-0.0	+0.2	-0.5	-0.5
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.5	+0.2	+0.1	-0.2	-0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.6	-0.1	+0.4	-0.4	-0.2
stress	R2A with Fusaric 120 ug/mL	+0.6	-0.4	-0.5	-0.5	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2	-0.4	-0.1	-0.6	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.7	-0.1	-0.1	-0.1	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.9	+0.0	+0.4	+0.1	-0.2
phage	JP1 MOI 10	-1.3	-0.5	+0.1	-0.6	+1.0
stress	R2A with Fusaric 120 ug/mL	+0.8	-0.4	-0.6	-0.4	-0.7
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.8	+0.3	-0.0	+0.4	-0.2
phage	JP1 MOI 1	-0.7	-0.2	-0.5	-0.5	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.1	-0.3	+0.2	-0.0	+1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2	+0.2	+0.1	+0.1	+1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+1.4	+0.3	+0.2	-0.4	-0.7
soil	soil sample 7; outgrowth in LB	+2.1	+0.3	-0.5	-0.4	+0.3
carbon source	2'-Deoxyinosine 5 mM (C)	+2.0	+0.3	+0.1	-0.0	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+2.6	+0.1	-0.2	+0.4	+0.9