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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1404 and GFF1405 are separated by 361 nucleotides
GFF1405 and GFF1406 are separated by 88 nucleotides
GFF1406 and GFF1407 are separated by 163 nucleotides
GFF1407 and GFF1408 are separated by 180 nucleotides
GFF1404 - Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE, at 49,459 to 50,649
GFF1404
GFF1405 - Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19), at 51,011 to 52,120
GFF1405
GFF1406 - Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein), at 52,209 to 53,567
GFF1406
GFF1407 - Maltose operon periplasmic protein MalM, at 53,731 to 54,648
GFF1407
GFF1408 - Chorismate--pyruvate lyase (EC 4.1.3.40), at 54,829 to 55,326
GFF1408
Group
Condition
GFF1404
GFF1405
GFF1406
GFF1407
GFF1408
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.6
-0.2
+0.1
+0.2
-0.9
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
-0.3
+0.1
-0.1
-0.0
-0.9
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.1
-0.0
-0.2
-0.1
-0.9
micoeukaryotes
Dictyostellum sp.mixed culture-2
-0.2
-0.1
-0.1
+0.1
-0.9
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-0.7
+0.3
+0.1
-0.1
-0.7
micoeukaryotes
Dictyostellum sp.mixed culture-1
-0.2
-0.0
-0.1
+0.1
-0.8
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
+0.3
+0.0
-0.1
-0.1
-0.8
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.4
-0.1
-0.1
-0.2
-0.6
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.5
-0.0
-0.1
-0.2
-0.8
phage
6H2_phage 10 MOI; agar plate assay
+0.6
+0.1
+0.0
-0.5
-0.8
phage
6F2_phage 15 MOI
+0.3
-0.3
+0.2
-0.3
-0.4
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-0.1
+0.2
-0.0
+0.2
-0.6
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.4
+0.0
-0.0
-0.0
-0.7
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.2
-0.0
-0.0
+0.2
-0.7
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.5
-0.1
-0.1
+0.1
-0.7
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.5
+0.0
+0.1
+0.2
-0.8
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.0
+0.3
-0.3
-0.4
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
-0.4
-0.2
-0.2
+0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
-0.1
-0.2
-0.1
+0.8
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.6
+0.0
-0.1
-0.0
+0.4
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-0.3
-0.0
-0.0
+0.3
+0.9
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.7
-0.1
+0.0
-0.1
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.3
+0.2
-0.0
-0.1
+1.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.5
-0.0
-0.2
-0.1
+0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
-0.0
+0.3
-0.0
-0.0
+0.7
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.4
-0.1
-0.1
+0.3
+0.4
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-0.6
+0.2
-0.1
+0.3
+1.4
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+0.1
-0.0
-0.1
-0.1
+1.6
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.7
-0.1
+0.2
+1.8
-0.5
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.1
+0.1
-0.2
+0.1
+2.5
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