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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF1401 and GFF1402 are separated by 165 nucleotides
GFF1402 and GFF1403 are separated by 14 nucleotides
GFF1403 and GFF1404 are separated by 131 nucleotides
GFF1404 and GFF1405 are separated by 361 nucleotides
GFF1401 - PsiE protein, at 46,302 to 46,712
GFF1401
GFF1402 - Maltose/maltodextrin ABC transporter, permease protein MalG, at 46,878 to 47,768
GFF1402
GFF1403 - Maltose/maltodextrin ABC transporter, permease protein MalF, at 47,783 to 49,327
GFF1403
GFF1404 - Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE, at 49,459 to 50,649
GFF1404
GFF1405 - Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19), at 51,011 to 52,120
GFF1405
Group
Condition
GFF1401
GFF1402
GFF1403
GFF1404
GFF1405
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.2
-0.0
+0.0
-0.2
-0.5
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.1
+0.1
+0.1
-0.6
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.4
-0.1
-0.0
-0.3
+0.2
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.1
-0.1
-0.1
-0.6
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.2
+0.2
-0.4
+0.2
-0.2
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
-0.2
+0.2
+0.0
-0.1
-0.1
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.3
+0.1
-0.1
-0.0
+0.2
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
-0.2
-0.0
+0.3
+0.1
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.1
+0.0
+0.0
+0.3
-0.4
nophagecontrol
No phage control
-0.1
+0.1
-0.1
+0.3
-0.1
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.2
+0.1
+0.1
-0.3
-0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
+0.3
+0.1
+0.1
-0.7
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
+0.2
+0.1
+0.0
-0.4
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.4
+0.1
+0.0
+0.5
-0.1
phage
6H2_phage 10 MOI; agar plate assay
-0.2
+0.1
-0.4
+0.6
+0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.3
-0.2
+0.0
+0.6
+0.0
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.2
+0.0
-0.0
+0.5
-0.0
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
+0.3
+0.2
+0.1
-0.3
+0.1
phage
6F2_phage 15 MOI
+0.4
-0.0
+0.0
+0.3
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-0.1
+0.1
+0.3
-0.1
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.2
+0.1
+0.1
+0.5
-0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.0
+0.5
+0.1
-0.2
-0.0
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
+0.1
-0.1
+0.1
+0.4
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.2
+0.0
-0.0
+0.7
-0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.1
+0.1
+0.1
+0.4
-0.1
phage
phi19h1_phage 15 MOI
-0.1
+0.1
-0.0
+0.4
+0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.0
-0.0
+0.1
+0.3
+0.3
phage
6F2_phage 15 MOI
+0.5
+0.1
+0.1
+0.3
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.5
+0.0
+0.3
+0.1
+0.1
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-0.0
+0.5
+0.5
+0.7
-0.1
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